Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TTC9CQ8N5M4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TTC9CQ8N5M4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TTC9CQ8N5M4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.75■□□□□ 0.27
TTC9CQ8N5M4 AL354811.1-201ENST00000610286 706 ntBASIC16.75■□□□□ 0.27
TTC9CQ8N5M4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TTC9CQ8N5M4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.75■□□□□ 0.27
TTC9CQ8N5M4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TTC9CQ8N5M4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC16.75■□□□□ 0.27
TTC9CQ8N5M4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TTC9CQ8N5M4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TTC9CQ8N5M4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.75■□□□□ 0.27
TTC9CQ8N5M4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TTC9CQ8N5M4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TTC9CQ8N5M4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TTC9CQ8N5M4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TTC9CQ8N5M4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.74■□□□□ 0.27
TTC9CQ8N5M4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TTC9CQ8N5M4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TTC9CQ8N5M4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
TTC9CQ8N5M4 AL358852.1-201ENST00000623174 1268 ntBASIC16.74■□□□□ 0.27
TTC9CQ8N5M4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TTC9CQ8N5M4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.74■□□□□ 0.27
TTC9CQ8N5M4 AC005224.4-201ENST00000583262 1652 ntBASIC16.74■□□□□ 0.27
TTC9CQ8N5M4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TTC9CQ8N5M4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TTC9CQ8N5M4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TTC9CQ8N5M4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TTC9CQ8N5M4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TTC9CQ8N5M4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.74■□□□□ 0.27
TTC9CQ8N5M4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.73■□□□□ 0.27
TTC9CQ8N5M4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.73■□□□□ 0.27
TTC9CQ8N5M4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.73■□□□□ 0.27
TTC9CQ8N5M4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TTC9CQ8N5M4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.73■□□□□ 0.27
TTC9CQ8N5M4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TTC9CQ8N5M4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TTC9CQ8N5M4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TTC9CQ8N5M4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.73■□□□□ 0.27
TTC9CQ8N5M4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TTC9CQ8N5M4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TTC9CQ8N5M4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TTC9CQ8N5M4 IRS3P-201ENST00000223076 1006 ntBASIC16.73■□□□□ 0.27
TTC9CQ8N5M4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
TTC9CQ8N5M4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TTC9CQ8N5M4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.73■□□□□ 0.27
TTC9CQ8N5M4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.73■□□□□ 0.27
TTC9CQ8N5M4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TTC9CQ8N5M4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TTC9CQ8N5M4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TTC9CQ8N5M4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TTC9CQ8N5M4 AC055733.4-201ENST00000638462 1354 ntBASIC16.73■□□□□ 0.27
TTC9CQ8N5M4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
TTC9CQ8N5M4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.73■□□□□ 0.27
TTC9CQ8N5M4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TTC9CQ8N5M4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.73■□□□□ 0.27
TTC9CQ8N5M4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.73■□□□□ 0.27
TTC9CQ8N5M4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TTC9CQ8N5M4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TTC9CQ8N5M4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.72■□□□□ 0.27
TTC9CQ8N5M4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC16.72■□□□□ 0.27
TTC9CQ8N5M4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TTC9CQ8N5M4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.72■□□□□ 0.27
TTC9CQ8N5M4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TTC9CQ8N5M4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TTC9CQ8N5M4 AC105265.2-201ENST00000467189 838 ntBASIC16.72■□□□□ 0.27
TTC9CQ8N5M4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.72■□□□□ 0.27
TTC9CQ8N5M4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TTC9CQ8N5M4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TTC9CQ8N5M4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.72■□□□□ 0.27
TTC9CQ8N5M4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.72■□□□□ 0.27
TTC9CQ8N5M4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TTC9CQ8N5M4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TTC9CQ8N5M4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TTC9CQ8N5M4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TTC9CQ8N5M4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TTC9CQ8N5M4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TTC9CQ8N5M4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TTC9CQ8N5M4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TTC9CQ8N5M4 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.71■□□□□ 0.27
TTC9CQ8N5M4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.71■□□□□ 0.27
TTC9CQ8N5M4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.71■□□□□ 0.27
TTC9CQ8N5M4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.71■□□□□ 0.27
TTC9CQ8N5M4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.71■□□□□ 0.27
TTC9CQ8N5M4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TTC9CQ8N5M4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TTC9CQ8N5M4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
TTC9CQ8N5M4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.71■□□□□ 0.27
TTC9CQ8N5M4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TTC9CQ8N5M4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.71■□□□□ 0.27
TTC9CQ8N5M4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TTC9CQ8N5M4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.71■□□□□ 0.27
TTC9CQ8N5M4 Z98882.1-201ENST00000622160 2253 ntBASIC16.71■□□□□ 0.27
TTC9CQ8N5M4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TTC9CQ8N5M4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.7■□□□□ 0.26
TTC9CQ8N5M4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TTC9CQ8N5M4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TTC9CQ8N5M4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TTC9CQ8N5M4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TTC9CQ8N5M4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms