Protein–RNA interactions for Protein: Q9NS62

THSD1, Thrombospondin type-1 domain-containing protein 1, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1Q9NS62 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.7■□□□□ 0.9
THSD1Q9NS62 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
THSD1Q9NS62 AC083906.2-201ENST00000511578 360 ntBASIC20.7■□□□□ 0.9
THSD1Q9NS62 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
THSD1Q9NS62 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.7■□□□□ 0.9
THSD1Q9NS62 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
THSD1Q9NS62 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
THSD1Q9NS62 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
THSD1Q9NS62 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
THSD1Q9NS62 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
THSD1Q9NS62 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
THSD1Q9NS62 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.69■□□□□ 0.9
THSD1Q9NS62 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
THSD1Q9NS62 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
THSD1Q9NS62 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
THSD1Q9NS62 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
THSD1Q9NS62 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
THSD1Q9NS62 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
THSD1Q9NS62 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
THSD1Q9NS62 TSPY6P-201ENST00000448518 926 ntBASIC20.69■□□□□ 0.9
THSD1Q9NS62 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.69■□□□□ 0.9
THSD1Q9NS62 KRT18P6-201ENST00000555540 1265 ntBASIC20.69■□□□□ 0.9
THSD1Q9NS62 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
THSD1Q9NS62 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
THSD1Q9NS62 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
THSD1Q9NS62 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
THSD1Q9NS62 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
THSD1Q9NS62 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
THSD1Q9NS62 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
THSD1Q9NS62 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
THSD1Q9NS62 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
THSD1Q9NS62 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.69■□□□□ 0.9
THSD1Q9NS62 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.69■□□□□ 0.9
THSD1Q9NS62 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
THSD1Q9NS62 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.69■□□□□ 0.9
THSD1Q9NS62 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
THSD1Q9NS62 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
THSD1Q9NS62 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
THSD1Q9NS62 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.68■□□□□ 0.9
THSD1Q9NS62 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.68■□□□□ 0.9
THSD1Q9NS62 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.68■□□□□ 0.9
THSD1Q9NS62 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
THSD1Q9NS62 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
THSD1Q9NS62 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
THSD1Q9NS62 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
THSD1Q9NS62 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
THSD1Q9NS62 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
THSD1Q9NS62 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.68■□□□□ 0.9
THSD1Q9NS62 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
THSD1Q9NS62 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
THSD1Q9NS62 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
THSD1Q9NS62 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.67■□□□□ 0.9
THSD1Q9NS62 AL353803.4-201ENST00000565882 1934 ntBASIC20.67■□□□□ 0.9
THSD1Q9NS62 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
THSD1Q9NS62 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
THSD1Q9NS62 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
THSD1Q9NS62 SLC29A4P1-201ENST00000398760 971 ntBASIC20.67■□□□□ 0.9
THSD1Q9NS62 AC007322.1-201ENST00000426983 750 ntBASIC20.67■□□□□ 0.9
THSD1Q9NS62 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.67■□□□□ 0.9
THSD1Q9NS62 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.67■□□□□ 0.9
THSD1Q9NS62 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
THSD1Q9NS62 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.67■□□□□ 0.9
THSD1Q9NS62 OXCT2P1-201ENST00000447263 1535 ntBASIC20.67■□□□□ 0.9
THSD1Q9NS62 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.67■□□□□ 0.9
THSD1Q9NS62 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
THSD1Q9NS62 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
THSD1Q9NS62 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.66■□□□□ 0.9
THSD1Q9NS62 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
THSD1Q9NS62 AC005181.1-201ENST00000604782 1256 ntBASIC20.66■□□□□ 0.9
THSD1Q9NS62 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.66■□□□□ 0.9
THSD1Q9NS62 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
THSD1Q9NS62 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
THSD1Q9NS62 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
THSD1Q9NS62 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
THSD1Q9NS62 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
THSD1Q9NS62 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
THSD1Q9NS62 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
THSD1Q9NS62 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.65■□□□□ 0.9
THSD1Q9NS62 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
THSD1Q9NS62 KRT87P-202ENST00000534226 1464 ntBASIC20.65■□□□□ 0.9
THSD1Q9NS62 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.65■□□□□ 0.9
THSD1Q9NS62 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
THSD1Q9NS62 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
THSD1Q9NS62 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
THSD1Q9NS62 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
THSD1Q9NS62 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.65■□□□□ 0.9
THSD1Q9NS62 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.65■□□□□ 0.9
THSD1Q9NS62 AL050303.2-201ENST00000619798 666 ntBASIC20.65■□□□□ 0.9
THSD1Q9NS62 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.65■□□□□ 0.9
THSD1Q9NS62 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
THSD1Q9NS62 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
THSD1Q9NS62 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
THSD1Q9NS62 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
THSD1Q9NS62 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.65■□□□□ 0.9
THSD1Q9NS62 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
THSD1Q9NS62 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
THSD1Q9NS62 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.64■□□□□ 0.9
THSD1Q9NS62 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
THSD1Q9NS62 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
THSD1Q9NS62 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms