Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS25Q9BRG1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14.89□□□□□ -0.03
VPS25Q9BRG1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VPS25Q9BRG1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS25Q9BRG1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VPS25Q9BRG1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS25Q9BRG1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS25Q9BRG1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS25Q9BRG1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC14.89□□□□□ -0.03
VPS25Q9BRG1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
VPS25Q9BRG1 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VPS25Q9BRG1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS25Q9BRG1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS25Q9BRG1 AL031258.1-201ENST00000623562 325 ntBASIC14.89□□□□□ -0.03
VPS25Q9BRG1 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS25Q9BRG1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC14.89□□□□□ -0.03
VPS25Q9BRG1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS25Q9BRG1 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
VPS25Q9BRG1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC14.89□□□□□ -0.03
VPS25Q9BRG1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS25Q9BRG1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS25Q9BRG1 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS25Q9BRG1 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
VPS25Q9BRG1 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VPS25Q9BRG1 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS25Q9BRG1 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
VPS25Q9BRG1 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.88□□□□□ -0.03
VPS25Q9BRG1 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS25Q9BRG1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
VPS25Q9BRG1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VPS25Q9BRG1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VPS25Q9BRG1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.88□□□□□ -0.03
VPS25Q9BRG1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.88□□□□□ -0.03
VPS25Q9BRG1 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
VPS25Q9BRG1 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS25Q9BRG1 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS25Q9BRG1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC14.88□□□□□ -0.03
VPS25Q9BRG1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
VPS25Q9BRG1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
VPS25Q9BRG1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VPS25Q9BRG1 NEFHP1-201ENST00000412845 2629 ntBASIC14.88□□□□□ -0.03
VPS25Q9BRG1 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS25Q9BRG1 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
VPS25Q9BRG1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS25Q9BRG1 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.88□□□□□ -0.03
VPS25Q9BRG1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS25Q9BRG1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS25Q9BRG1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC14.87□□□□□ -0.03
VPS25Q9BRG1 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS25Q9BRG1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS25Q9BRG1 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS25Q9BRG1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
VPS25Q9BRG1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS25Q9BRG1 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VPS25Q9BRG1 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS25Q9BRG1 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VPS25Q9BRG1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
VPS25Q9BRG1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VPS25Q9BRG1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VPS25Q9BRG1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VPS25Q9BRG1 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
VPS25Q9BRG1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC14.87□□□□□ -0.03
VPS25Q9BRG1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VPS25Q9BRG1 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS25Q9BRG1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS25Q9BRG1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC14.87□□□□□ -0.03
VPS25Q9BRG1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
VPS25Q9BRG1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC14.87□□□□□ -0.03
VPS25Q9BRG1 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
VPS25Q9BRG1 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS25Q9BRG1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC14.87□□□□□ -0.03
VPS25Q9BRG1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS25Q9BRG1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS25Q9BRG1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS25Q9BRG1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.86□□□□□ -0.03
VPS25Q9BRG1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS25Q9BRG1 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VPS25Q9BRG1 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
VPS25Q9BRG1 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS25Q9BRG1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VPS25Q9BRG1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC14.86□□□□□ -0.03
VPS25Q9BRG1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS25Q9BRG1 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VPS25Q9BRG1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS25Q9BRG1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS25Q9BRG1 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VPS25Q9BRG1 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
VPS25Q9BRG1 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS25Q9BRG1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS25Q9BRG1 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS25Q9BRG1 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS25Q9BRG1 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS25Q9BRG1 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS25Q9BRG1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS25Q9BRG1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS25Q9BRG1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC14.85□□□□□ -0.03
VPS25Q9BRG1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS25Q9BRG1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC14.85□□□□□ -0.03
VPS25Q9BRG1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS25Q9BRG1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms