Protein–RNA interactions for Protein: P11940

PABPC1, Polyadenylate-binding protein 1, humanhuman

Known RBP Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11940 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
PABPC1P11940 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PABPC1P11940 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.77■■□□□ 1.08
PABPC1P11940 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PABPC1P11940 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.77■■□□□ 1.08
PABPC1P11940 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.77■■□□□ 1.08
PABPC1P11940 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.77■■□□□ 1.08
PABPC1P11940 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.77■■□□□ 1.08
PABPC1P11940 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.77■■□□□ 1.08
PABPC1P11940 EEF1DP3-203ENST00000566025 782 ntBASIC21.77■■□□□ 1.08
PABPC1P11940 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.77■■□□□ 1.08
PABPC1P11940 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.77■■□□□ 1.08
PABPC1P11940 MFSD11-216ENST00000590393 1141 ntBASIC21.77■■□□□ 1.08
PABPC1P11940 AC080038.3-201ENST00000623346 1952 ntBASIC21.77■■□□□ 1.08
PABPC1P11940 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PABPC1P11940 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.77■■□□□ 1.08
PABPC1P11940 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PABPC1P11940 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PABPC1P11940 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
PABPC1P11940 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PABPC1P11940 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PABPC1P11940 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.76■■□□□ 1.07
PABPC1P11940 AC026185.1-201ENST00000445748 174 ntBASIC21.76■■□□□ 1.07
PABPC1P11940 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PABPC1P11940 AC053503.5-201ENST00000601508 636 ntBASIC21.76■■□□□ 1.07
PABPC1P11940 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PABPC1P11940 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PABPC1P11940 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.76■■□□□ 1.07
PABPC1P11940 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PABPC1P11940 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PABPC1P11940 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PABPC1P11940 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PABPC1P11940 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.75■■□□□ 1.07
PABPC1P11940 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.75■■□□□ 1.07
PABPC1P11940 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PABPC1P11940 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.75■■□□□ 1.07
PABPC1P11940 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PABPC1P11940 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PABPC1P11940 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PABPC1P11940 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PABPC1P11940 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PABPC1P11940 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PABPC1P11940 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PABPC1P11940 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.75■■□□□ 1.07
PABPC1P11940 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.75■■□□□ 1.07
PABPC1P11940 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.75■■□□□ 1.07
PABPC1P11940 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.75■■□□□ 1.07
PABPC1P11940 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PABPC1P11940 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PABPC1P11940 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PABPC1P11940 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.74■■□□□ 1.07
PABPC1P11940 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PABPC1P11940 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.74■■□□□ 1.07
PABPC1P11940 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PABPC1P11940 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
PABPC1P11940 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.74■■□□□ 1.07
PABPC1P11940 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PABPC1P11940 MYCNOS-205ENST00000641950 531 ntBASIC21.74■■□□□ 1.07
PABPC1P11940 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PABPC1P11940 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PABPC1P11940 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PABPC1P11940 AC092053.2-201ENST00000640557 1818 ntBASIC21.73■■□□□ 1.07
PABPC1P11940 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.73■■□□□ 1.07
PABPC1P11940 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PABPC1P11940 ID1-201ENST00000376105 1233 ntBASIC21.73■■□□□ 1.07
PABPC1P11940 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.73■■□□□ 1.07
PABPC1P11940 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PABPC1P11940 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.73■■□□□ 1.07
PABPC1P11940 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.73■■□□□ 1.07
PABPC1P11940 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PABPC1P11940 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PABPC1P11940 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.73■■□□□ 1.07
PABPC1P11940 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.73■■□□□ 1.07
PABPC1P11940 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.73■■□□□ 1.07
PABPC1P11940 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PABPC1P11940 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PABPC1P11940 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PABPC1P11940 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PABPC1P11940 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.72■■□□□ 1.07
PABPC1P11940 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PABPC1P11940 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PABPC1P11940 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PABPC1P11940 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PABPC1P11940 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.72■■□□□ 1.07
PABPC1P11940 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
PABPC1P11940 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PABPC1P11940 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PABPC1P11940 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.72■■□□□ 1.07
PABPC1P11940 KRT18P20-201ENST00000548986 1279 ntBASIC21.72■■□□□ 1.07
PABPC1P11940 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.72■■□□□ 1.07
PABPC1P11940 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PABPC1P11940 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.72■■□□□ 1.07
PABPC1P11940 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.72■■□□□ 1.07
PABPC1P11940 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.72■■□□□ 1.07
PABPC1P11940 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.72■■□□□ 1.07
PABPC1P11940 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PABPC1P11940 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.72■■□□□ 1.07
PABPC1P11940 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PABPC1P11940 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PABPC1P11940 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms