Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 ABHD17AP6-201ENST00000458502 1044 ntBASIC32.81■■■□□ 2.84
COL17A1Q9UMD9 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
COL17A1Q9UMD9 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC32.81■■■□□ 2.84
COL17A1Q9UMD9 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
COL17A1Q9UMD9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC32.8■■■□□ 2.84
COL17A1Q9UMD9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC32.8■■■□□ 2.84
COL17A1Q9UMD9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC32.8■■■□□ 2.84
COL17A1Q9UMD9 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC32.8■■■□□ 2.84
COL17A1Q9UMD9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC32.8■■■□□ 2.84
COL17A1Q9UMD9 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
COL17A1Q9UMD9 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
COL17A1Q9UMD9 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
COL17A1Q9UMD9 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC32.8■■■□□ 2.84
COL17A1Q9UMD9 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC32.8■■■□□ 2.84
COL17A1Q9UMD9 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC32.8■■■□□ 2.84
COL17A1Q9UMD9 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC32.8■■■□□ 2.84
COL17A1Q9UMD9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC32.79■■■□□ 2.84
COL17A1Q9UMD9 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
COL17A1Q9UMD9 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC32.79■■■□□ 2.84
COL17A1Q9UMD9 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC32.79■■■□□ 2.84
COL17A1Q9UMD9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC32.79■■■□□ 2.84
COL17A1Q9UMD9 EEF1DP3-203ENST00000566025 782 ntBASIC32.79■■■□□ 2.84
COL17A1Q9UMD9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC32.79■■■□□ 2.84
COL17A1Q9UMD9 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
COL17A1Q9UMD9 AC079630.1-202ENST00000618127 1840 ntBASIC32.79■■■□□ 2.84
COL17A1Q9UMD9 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC32.78■■■□□ 2.84
COL17A1Q9UMD9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC32.78■■■□□ 2.84
COL17A1Q9UMD9 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC32.78■■■□□ 2.84
COL17A1Q9UMD9 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC32.78■■■□□ 2.84
COL17A1Q9UMD9 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
COL17A1Q9UMD9 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC32.78■■■□□ 2.84
COL17A1Q9UMD9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
COL17A1Q9UMD9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
COL17A1Q9UMD9 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC32.77■■■□□ 2.84
COL17A1Q9UMD9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
COL17A1Q9UMD9 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
COL17A1Q9UMD9 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
COL17A1Q9UMD9 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC32.77■■■□□ 2.84
COL17A1Q9UMD9 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC32.77■■■□□ 2.84
COL17A1Q9UMD9 WDR88-203ENST00000592765 651 ntTSL 5 BASIC32.77■■■□□ 2.84
COL17A1Q9UMD9 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
COL17A1Q9UMD9 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC32.76■■■□□ 2.84
COL17A1Q9UMD9 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC32.76■■■□□ 2.84
COL17A1Q9UMD9 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC32.76■■■□□ 2.84
COL17A1Q9UMD9 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC32.76■■■□□ 2.83
COL17A1Q9UMD9 DUSP8P3-201ENST00000399571 1760 ntBASIC32.76■■■□□ 2.83
COL17A1Q9UMD9 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC32.76■■■□□ 2.83
COL17A1Q9UMD9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
COL17A1Q9UMD9 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC32.76■■■□□ 2.83
COL17A1Q9UMD9 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
COL17A1Q9UMD9 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC32.76■■■□□ 2.83
COL17A1Q9UMD9 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
COL17A1Q9UMD9 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
COL17A1Q9UMD9 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC32.75■■■□□ 2.83
COL17A1Q9UMD9 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC32.75■■■□□ 2.83
COL17A1Q9UMD9 SPIB-206ENST00000596074 847 ntTSL 2 BASIC32.75■■■□□ 2.83
COL17A1Q9UMD9 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC32.75■■■□□ 2.83
COL17A1Q9UMD9 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
COL17A1Q9UMD9 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC32.75■■■□□ 2.83
COL17A1Q9UMD9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC32.75■■■□□ 2.83
COL17A1Q9UMD9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC32.75■■■□□ 2.83
COL17A1Q9UMD9 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC32.74■■■□□ 2.83
COL17A1Q9UMD9 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
COL17A1Q9UMD9 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
COL17A1Q9UMD9 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC32.74■■■□□ 2.83
COL17A1Q9UMD9 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC32.74■■■□□ 2.83
COL17A1Q9UMD9 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC32.74■■■□□ 2.83
COL17A1Q9UMD9 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC32.74■■■□□ 2.83
COL17A1Q9UMD9 KRT18P35-201ENST00000510488 1269 ntBASIC32.74■■■□□ 2.83
COL17A1Q9UMD9 RN7SL471P-201ENST00000580476 299 ntBASIC32.74■■■□□ 2.83
COL17A1Q9UMD9 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC32.74■■■□□ 2.83
COL17A1Q9UMD9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC32.74■■■□□ 2.83
COL17A1Q9UMD9 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC32.74■■■□□ 2.83
COL17A1Q9UMD9 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC32.74■■■□□ 2.83
COL17A1Q9UMD9 AC097493.4-201ENST00000641197 219 ntBASIC32.74■■■□□ 2.83
COL17A1Q9UMD9 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC32.73■■■□□ 2.83
COL17A1Q9UMD9 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
COL17A1Q9UMD9 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
COL17A1Q9UMD9 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
COL17A1Q9UMD9 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC32.73■■■□□ 2.83
COL17A1Q9UMD9 REXO2-216ENST00000544196 452 ntTSL 3 BASIC32.73■■■□□ 2.83
COL17A1Q9UMD9 PPOX-219ENST00000544598 813 ntTSL 2 BASIC32.73■■■□□ 2.83
COL17A1Q9UMD9 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC32.72■■■□□ 2.83
COL17A1Q9UMD9 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
COL17A1Q9UMD9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
COL17A1Q9UMD9 AC087499.1-201ENST00000418141 1075 ntBASIC32.72■■■□□ 2.83
COL17A1Q9UMD9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC32.72■■■□□ 2.83
COL17A1Q9UMD9 C2orf69P4-201ENST00000565394 541 ntBASIC32.72■■■□□ 2.83
COL17A1Q9UMD9 AC060766.5-201ENST00000590539 871 ntBASIC32.72■■■□□ 2.83
COL17A1Q9UMD9 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC32.72■■■□□ 2.83
COL17A1Q9UMD9 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
COL17A1Q9UMD9 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC32.72■■■□□ 2.83
COL17A1Q9UMD9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC32.71■■■□□ 2.83
COL17A1Q9UMD9 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
COL17A1Q9UMD9 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC32.71■■■□□ 2.83
COL17A1Q9UMD9 TSPY15P-201ENST00000457163 923 ntBASIC32.71■■■□□ 2.83
COL17A1Q9UMD9 AL162412.1-201ENST00000567129 965 ntBASIC32.71■■■□□ 2.83
COL17A1Q9UMD9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC32.71■■■□□ 2.83
COL17A1Q9UMD9 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC32.7■■■□□ 2.83
COL17A1Q9UMD9 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms