Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC71LQ8N9Z2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CCDC71LQ8N9Z2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.71■□□□□ 0.43
CCDC71LQ8N9Z2 AL499627.2-201ENST00000606283 725 ntBASIC17.71■□□□□ 0.43
CCDC71LQ8N9Z2 AL031848.2-201ENST00000607670 837 ntBASIC17.71■□□□□ 0.43
CCDC71LQ8N9Z2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC71LQ8N9Z2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC71LQ8N9Z2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC71LQ8N9Z2 OR7E47P-201ENST00000546390 1422 ntBASIC17.71■□□□□ 0.43
CCDC71LQ8N9Z2 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC71LQ8N9Z2 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC71LQ8N9Z2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC71LQ8N9Z2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC71LQ8N9Z2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC71LQ8N9Z2 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC71LQ8N9Z2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC71LQ8N9Z2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC71LQ8N9Z2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CCDC71LQ8N9Z2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC71LQ8N9Z2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCDC71LQ8N9Z2 AC103834.1-201ENST00000520383 144 ntBASIC17.7■□□□□ 0.42
CCDC71LQ8N9Z2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC71LQ8N9Z2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CCDC71LQ8N9Z2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC71LQ8N9Z2 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC71LQ8N9Z2 KRT8P33-201ENST00000508125 1423 ntBASIC17.7■□□□□ 0.42
CCDC71LQ8N9Z2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC71LQ8N9Z2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC71LQ8N9Z2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC71LQ8N9Z2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCDC71LQ8N9Z2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC71LQ8N9Z2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC71LQ8N9Z2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC71LQ8N9Z2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC71LQ8N9Z2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CCDC71LQ8N9Z2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
CCDC71LQ8N9Z2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC71LQ8N9Z2 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC71LQ8N9Z2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC71LQ8N9Z2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC71LQ8N9Z2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC71LQ8N9Z2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC71LQ8N9Z2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC71LQ8N9Z2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC71LQ8N9Z2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC71LQ8N9Z2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC71LQ8N9Z2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CCDC71LQ8N9Z2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC71LQ8N9Z2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC71LQ8N9Z2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC71LQ8N9Z2 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC71LQ8N9Z2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC71LQ8N9Z2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC71LQ8N9Z2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC71LQ8N9Z2 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC71LQ8N9Z2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC71LQ8N9Z2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.68■□□□□ 0.42
CCDC71LQ8N9Z2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC71LQ8N9Z2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC71LQ8N9Z2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
CCDC71LQ8N9Z2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC71LQ8N9Z2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC71LQ8N9Z2 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC71LQ8N9Z2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC71LQ8N9Z2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCDC71LQ8N9Z2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC71LQ8N9Z2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC71LQ8N9Z2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC71LQ8N9Z2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC71LQ8N9Z2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC71LQ8N9Z2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CCDC71LQ8N9Z2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC71LQ8N9Z2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC71LQ8N9Z2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC71LQ8N9Z2 AL157384.1-201ENST00000445995 2473 ntBASIC17.66■□□□□ 0.42
CCDC71LQ8N9Z2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC71LQ8N9Z2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC71LQ8N9Z2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC71LQ8N9Z2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC71LQ8N9Z2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC71LQ8N9Z2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CCDC71LQ8N9Z2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC71LQ8N9Z2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC71LQ8N9Z2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC71LQ8N9Z2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC71LQ8N9Z2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC71LQ8N9Z2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC71LQ8N9Z2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC71LQ8N9Z2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC71LQ8N9Z2 AL031602.1-201ENST00000633169 911 ntBASIC17.66■□□□□ 0.42
CCDC71LQ8N9Z2 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC71LQ8N9Z2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC71LQ8N9Z2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC71LQ8N9Z2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC71LQ8N9Z2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC71LQ8N9Z2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC71LQ8N9Z2 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC71LQ8N9Z2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC71LQ8N9Z2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC71LQ8N9Z2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms