Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT78Q8N1N4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.59■□□□□ 0.89
KRT78Q8N1N4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
KRT78Q8N1N4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.59■□□□□ 0.89
KRT78Q8N1N4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.59■□□□□ 0.89
KRT78Q8N1N4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KRT78Q8N1N4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT78Q8N1N4 FBXW4P1-201ENST00000426721 2239 ntBASIC20.59■□□□□ 0.89
KRT78Q8N1N4 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.59■□□□□ 0.89
KRT78Q8N1N4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.59■□□□□ 0.89
KRT78Q8N1N4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.59■□□□□ 0.89
KRT78Q8N1N4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
KRT78Q8N1N4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
KRT78Q8N1N4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.59■□□□□ 0.89
KRT78Q8N1N4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT78Q8N1N4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KRT78Q8N1N4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT78Q8N1N4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT78Q8N1N4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.58■□□□□ 0.89
KRT78Q8N1N4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KRT78Q8N1N4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
KRT78Q8N1N4 AC009237.3-201ENST00000393279 1427 ntBASIC20.58■□□□□ 0.88
KRT78Q8N1N4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
KRT78Q8N1N4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.58■□□□□ 0.88
KRT78Q8N1N4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
KRT78Q8N1N4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KRT78Q8N1N4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
KRT78Q8N1N4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT78Q8N1N4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KRT78Q8N1N4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT78Q8N1N4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT78Q8N1N4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT78Q8N1N4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT78Q8N1N4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT78Q8N1N4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT78Q8N1N4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT78Q8N1N4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.57■□□□□ 0.88
KRT78Q8N1N4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.57■□□□□ 0.88
KRT78Q8N1N4 AC105265.2-201ENST00000467189 838 ntBASIC20.57■□□□□ 0.88
KRT78Q8N1N4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT78Q8N1N4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.57■□□□□ 0.88
KRT78Q8N1N4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT78Q8N1N4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
KRT78Q8N1N4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KRT78Q8N1N4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT78Q8N1N4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.56■□□□□ 0.88
KRT78Q8N1N4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT78Q8N1N4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.56■□□□□ 0.88
KRT78Q8N1N4 AC104564.3-201ENST00000582367 638 ntBASIC20.56■□□□□ 0.88
KRT78Q8N1N4 AL354811.1-201ENST00000610286 706 ntBASIC20.56■□□□□ 0.88
KRT78Q8N1N4 AC010542.4-201ENST00000563151 1910 ntBASIC20.56■□□□□ 0.88
KRT78Q8N1N4 BX005040.4-201ENST00000637145 1518 ntBASIC20.56■□□□□ 0.88
KRT78Q8N1N4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT78Q8N1N4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT78Q8N1N4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.56■□□□□ 0.88
KRT78Q8N1N4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT78Q8N1N4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT78Q8N1N4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
KRT78Q8N1N4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT78Q8N1N4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT78Q8N1N4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
KRT78Q8N1N4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KRT78Q8N1N4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.55■□□□□ 0.88
KRT78Q8N1N4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.55■□□□□ 0.88
KRT78Q8N1N4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.55■□□□□ 0.88
KRT78Q8N1N4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
KRT78Q8N1N4 AL358852.1-201ENST00000623174 1268 ntBASIC20.55■□□□□ 0.88
KRT78Q8N1N4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT78Q8N1N4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT78Q8N1N4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT78Q8N1N4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.55■□□□□ 0.88
KRT78Q8N1N4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT78Q8N1N4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT78Q8N1N4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRT78Q8N1N4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
KRT78Q8N1N4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT78Q8N1N4 IRS3P-201ENST00000223076 1006 ntBASIC20.54■□□□□ 0.88
KRT78Q8N1N4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT78Q8N1N4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
KRT78Q8N1N4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRT78Q8N1N4 AC012414.1-201ENST00000556676 535 ntBASIC20.54■□□□□ 0.88
KRT78Q8N1N4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.54■□□□□ 0.88
KRT78Q8N1N4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT78Q8N1N4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT78Q8N1N4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.54■□□□□ 0.88
KRT78Q8N1N4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT78Q8N1N4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.54■□□□□ 0.88
KRT78Q8N1N4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT78Q8N1N4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT78Q8N1N4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT78Q8N1N4 AP006587.3-201ENST00000525742 1516 ntBASIC20.53■□□□□ 0.88
KRT78Q8N1N4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.53■□□□□ 0.88
KRT78Q8N1N4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT78Q8N1N4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
KRT78Q8N1N4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
KRT78Q8N1N4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.53■□□□□ 0.88
KRT78Q8N1N4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.53■□□□□ 0.88
KRT78Q8N1N4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT78Q8N1N4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.53■□□□□ 0.88
KRT78Q8N1N4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms