Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.31■■□□□ 1
HMGCLP35914 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.31■■□□□ 1
HMGCLP35914 TERF1P2-201ENST00000583350 1212 ntBASIC21.31■■□□□ 1
HMGCLP35914 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.31■■□□□ 1
HMGCLP35914 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.31■■□□□ 1
HMGCLP35914 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HMGCLP35914 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.31■■□□□ 1
HMGCLP35914 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
HMGCLP35914 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.3■■□□□ 1
HMGCLP35914 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
HMGCLP35914 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.3■■□□□ 1
HMGCLP35914 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HMGCLP35914 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HMGCLP35914 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.3■■□□□ 1
HMGCLP35914 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HMGCLP35914 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
HMGCLP35914 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.3■■□□□ 1
HMGCLP35914 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.3■■□□□ 1
HMGCLP35914 AC097381.1-201ENST00000429019 1296 ntBASIC21.3■■□□□ 1
HMGCLP35914 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.3■■□□□ 1
HMGCLP35914 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.3■■□□□ 1
HMGCLP35914 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.3■■□□□ 1
HMGCLP35914 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.3■■□□□ 1
HMGCLP35914 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
HMGCLP35914 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.3■■□□□ 1
HMGCLP35914 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.3■■□□□ 1
HMGCLP35914 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.3■■□□□ 1
HMGCLP35914 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.3■■□□□ 1
HMGCLP35914 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
HMGCLP35914 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
HMGCLP35914 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HMGCLP35914 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.29■■□□□ 1
HMGCLP35914 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HMGCLP35914 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
HMGCLP35914 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HMGCLP35914 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HMGCLP35914 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
HMGCLP35914 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.29■■□□□ 1
HMGCLP35914 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.29■■□□□ 1
HMGCLP35914 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
HMGCLP35914 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.29■■□□□ 1
HMGCLP35914 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.29■■□□□ 1
HMGCLP35914 MIR6821-201ENST00000617625 74 ntBASIC21.29■■□□□ 1
HMGCLP35914 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
HMGCLP35914 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.29■■□□□ 1
HMGCLP35914 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.29■■□□□ 1
HMGCLP35914 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.29■■□□□ 1
HMGCLP35914 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.29■■□□□ 1
HMGCLP35914 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
HMGCLP35914 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HMGCLP35914 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HMGCLP35914 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.28■■□□□ 1
HMGCLP35914 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
HMGCLP35914 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HMGCLP35914 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HMGCLP35914 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.28■■□□□ 1
HMGCLP35914 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HMGCLP35914 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
HMGCLP35914 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HMGCLP35914 CCDC92B-201ENST00000575506 885 ntBASIC21.28■■□□□ 1
HMGCLP35914 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
HMGCLP35914 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.28■■□□□ 1
HMGCLP35914 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
HMGCLP35914 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HMGCLP35914 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.28■■□□□ 1
HMGCLP35914 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
HMGCLP35914 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.28■■□□□ 1
HMGCLP35914 FBXW4P1-201ENST00000426721 2239 ntBASIC21.28■■□□□ 1
HMGCLP35914 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
HMGCLP35914 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
HMGCLP35914 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.27■■□□□ 1
HMGCLP35914 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
HMGCLP35914 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.27■■□□□ 1
HMGCLP35914 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HMGCLP35914 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
HMGCLP35914 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.27■■□□□ 1
HMGCLP35914 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.27■■□□□ 1
HMGCLP35914 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.27■■□□□ 1
HMGCLP35914 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.27■■□□□ 1
HMGCLP35914 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HMGCLP35914 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HMGCLP35914 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HMGCLP35914 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HMGCLP35914 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HMGCLP35914 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
HMGCLP35914 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HMGCLP35914 AC104564.3-201ENST00000582367 638 ntBASIC21.26■□□□□ 0.99
HMGCLP35914 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.26■□□□□ 0.99
HMGCLP35914 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.26■□□□□ 0.99
HMGCLP35914 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HMGCLP35914 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.26■□□□□ 0.99
HMGCLP35914 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HMGCLP35914 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HMGCLP35914 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HMGCLP35914 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HMGCLP35914 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.25■□□□□ 0.99
HMGCLP35914 AC079140.4-201ENST00000507448 529 ntBASIC21.25■□□□□ 0.99
HMGCLP35914 KRT18P14-201ENST00000534205 1250 ntBASIC21.25■□□□□ 0.99
HMGCLP35914 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.25■□□□□ 0.99
HMGCLP35914 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms