Protein–RNA interactions for Protein: P29056

BRF1, Transcription factor IIIB 70 kDa subunit, yeastyeast

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRF1P29056 YOR082CYOR082C 342 nt3.66□□□□□ -1.82
BRF1P29056 CSH1YBR161W 1131 nt3.66□□□□□ -1.82
BRF1P29056 ARO1YDR127W 4767 nt3.66□□□□□ -1.82
BRF1P29056 MIP6YHR015W 1980 nt3.65□□□□□ -1.82
BRF1P29056 TCP1YDR212W 1680 nt3.65□□□□□ -1.82
BRF1P29056 THR4YCR053W 1545 nt3.65□□□□□ -1.82
BRF1P29056 EBS1YDR206W 2655 nt3.65□□□□□ -1.82
BRF1P29056 IZH1YDR492W 951 nt3.65□□□□□ -1.83
BRF1P29056 YPT35YHR105W 645 nt3.65□□□□□ -1.83
BRF1P29056 YLR154C-HYLR154C-H 132 nt3.65□□□□□ -1.83
BRF1P29056 YLR156C-AYLR156C-A 132 nt3.65□□□□□ -1.83
BRF1P29056 YLR157C-CYLR157C-C 132 nt3.65□□□□□ -1.83
BRF1P29056 YLR159C-AYLR159C-A 132 nt3.65□□□□□ -1.83
BRF1P29056 IMP1YMR150C 573 nt3.65□□□□□ -1.83
BRF1P29056 INN1YNL152W 1230 nt3.65□□□□□ -1.83
BRF1P29056 SYC1YOR179C 567 nt3.65□□□□□ -1.83
BRF1P29056 MRH4YGL064C 1686 nt3.65□□□□□ -1.83
BRF1P29056 DAN4YJR151C 3486 nt3.64□□□□□ -1.83
BRF1P29056 YOR365CYOR365C 2112 nt3.64□□□□□ -1.83
BRF1P29056 tC(GCA)BtC(GCA)B 72 nt3.64□□□□□ -1.83
BRF1P29056 tC(GCA)GtC(GCA)G 72 nt3.64□□□□□ -1.83
BRF1P29056 tC(GCA)P1tC(GCA)P1 72 nt3.64□□□□□ -1.83
BRF1P29056 tC(GCA)P2tC(GCA)P2 72 nt3.64□□□□□ -1.83
BRF1P29056 BUD26YDR241W 288 nt3.64□□□□□ -1.83
BRF1P29056 YGL006W-AYGL006W-A 111 nt3.64□□□□□ -1.83
BRF1P29056 DCG1YIR030C 735 nt3.64□□□□□ -1.83
BRF1P29056 YAL064W-BYAL064W-B 381 nt3.64□□□□□ -1.83
BRF1P29056 SUR1YPL057C 1149 nt3.64□□□□□ -1.83
BRF1P29056 BCH1YMR237W 2175 nt3.63□□□□□ -1.83
BRF1P29056 RSC1YGR056W 2787 nt3.63□□□□□ -1.83
BRF1P29056 MRPL11YDL202W 750 nt3.63□□□□□ -1.83
BRF1P29056 YDR271CYDR271C 372 nt3.63□□□□□ -1.83
BRF1P29056 USE1YGL098W 738 nt3.63□□□□□ -1.83
BRF1P29056 YIL156W-AYIL156W-A 402 nt3.63□□□□□ -1.83
BRF1P29056 ANB1YJR047C 474 nt3.63□□□□□ -1.83
BRF1P29056 AUR1YKL004W 1206 nt3.63□□□□□ -1.83
BRF1P29056 ILV5YLR355C 1188 nt3.63□□□□□ -1.83
BRF1P29056 YIP3YNL044W 531 nt3.63□□□□□ -1.83
BRF1P29056 RDS1YCR106W 2499 nt3.63□□□□□ -1.83
BRF1P29056 CHS3YBR023C 3498 nt3.63□□□□□ -1.83
BRF1P29056 TEC1YBR083W 1461 nt3.62□□□□□ -1.83
BRF1P29056 GTT2YLL060C 702 nt3.62□□□□□ -1.83
BRF1P29056 RIF2YLR453C 1188 nt3.62□□□□□ -1.83
BRF1P29056 TUM1YOR251C 915 nt3.62□□□□□ -1.83
BRF1P29056 MRPL27YBR282W 441 nt3.62□□□□□ -1.83
BRF1P29056 RRP7YCL031C 894 nt3.62□□□□□ -1.83
BRF1P29056 YLR446WYLR446W 1302 nt3.62□□□□□ -1.83
BRF1P29056 MDV1YJL112W 2145 nt3.62□□□□□ -1.83
BRF1P29056 JEN1YKL217W 1851 nt3.62□□□□□ -1.83
BRF1P29056 REG1YDR028C 3045 nt3.62□□□□□ -1.83
BRF1P29056 MAK21YDR060W 3078 nt3.62□□□□□ -1.83
BRF1P29056 CDC45YLR103C 1953 nt3.62□□□□□ -1.83
BRF1P29056 CDH1YGL003C 1701 nt3.61□□□□□ -1.83
BRF1P29056 NHP10YDL002C 612 nt3.61□□□□□ -1.83
BRF1P29056 snR78snR78 87 nt3.61□□□□□ -1.83
BRF1P29056 YGR051CYGR051C 324 nt3.61□□□□□ -1.83
BRF1P29056 LST7YGR057C 729 nt3.61□□□□□ -1.83
BRF1P29056 FOL2YGR267C 732 nt3.61□□□□□ -1.83
BRF1P29056 YIR023C-AYIR023C-A 324 nt3.61□□□□□ -1.83
BRF1P29056 SED5YLR026C 1023 nt3.61□□□□□ -1.83
BRF1P29056 AHP1YLR109W 531 nt3.61□□□□□ -1.83
BRF1P29056 RNH203YLR154C 333 nt3.61□□□□□ -1.83
BRF1P29056 YLR163W-AYLR163W-A 114 nt3.61□□□□□ -1.83
BRF1P29056 YMR310CYMR310C 954 nt3.61□□□□□ -1.83
BRF1P29056 YOL038C-AYOL038C-A 96 nt3.61□□□□□ -1.83
BRF1P29056 RIB4YOL143C 510 nt3.61□□□□□ -1.83
BRF1P29056 SMC3YJL074C 3693 nt3.61□□□□□ -1.83
BRF1P29056 VPS30YPL120W 1674 nt3.61□□□□□ -1.83
BRF1P29056 VPS53YJL029C 2469 nt3.61□□□□□ -1.83
BRF1P29056 DSS1YMR287C 2910 nt3.6□□□□□ -1.83
BRF1P29056 NKP1YDR383C 717 nt3.6□□□□□ -1.83
BRF1P29056 DLS1YJL065C 504 nt3.6□□□□□ -1.83
BRF1P29056 RPS21BYJL136C 264 nt3.6□□□□□ -1.83
BRF1P29056 YJR128WYJR128W 360 nt3.6□□□□□ -1.83
BRF1P29056 PML39YML107C 1005 nt3.6□□□□□ -1.83
BRF1P29056 PNO1YOR145C 825 nt3.6□□□□□ -1.83
BRF1P29056 PLP2YOR281C 861 nt3.6□□□□□ -1.83
BRF1P29056 YPR078CYPR078C 1119 nt3.6□□□□□ -1.83
BRF1P29056 ICS2YBR157C 768 nt3.6□□□□□ -1.83
BRF1P29056 KAR1YNL188W 1302 nt3.6□□□□□ -1.83
BRF1P29056 GPI13YLL031C 3054 nt3.59□□□□□ -1.83
BRF1P29056 ROM1YGR070W 3468 nt3.59□□□□□ -1.83
BRF1P29056 SLA1YBL007C 3735 nt3.59□□□□□ -1.83
BRF1P29056 PRP18YGR006W 756 nt3.59□□□□□ -1.83
BRF1P29056 CDC8YJR057W 651 nt3.59□□□□□ -1.83
BRF1P29056 AIM25YJR100C 984 nt3.59□□□□□ -1.83
BRF1P29056 OSW1YOR255W 837 nt3.59□□□□□ -1.83
BRF1P29056 YPR053CYPR053C 456 nt3.59□□□□□ -1.83
BRF1P29056 SPT10YJL127C 1923 nt3.59□□□□□ -1.83
BRF1P29056 UBP8YMR223W 1416 nt3.59□□□□□ -1.84
BRF1P29056 MSS4YDR208W 2340 nt3.59□□□□□ -1.84
BRF1P29056 STP2YHR006W 1626 nt3.59□□□□□ -1.84
BRF1P29056 SIZ1YDR409W 2715 nt3.58□□□□□ -1.84
BRF1P29056 ASI1YMR119W 1875 nt3.58□□□□□ -1.84
BRF1P29056 MSR1YHR091C 1932 nt3.58□□□□□ -1.84
BRF1P29056 MYO5YMR109W 3660 nt3.58□□□□□ -1.84
BRF1P29056 PLP1YDR183W 693 nt3.58□□□□□ -1.84
BRF1P29056 CGR1YGL029W 363 nt3.58□□□□□ -1.84
BRF1P29056 GSP1YLR293C 660 nt3.58□□□□□ -1.84
BRF1P29056 HHF2YNL030W 312 nt3.58□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 59 ms