Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 HSH155YMR288W 2916 nt3.32□□□□□ -1.88
TY1B-HO13535 DCP2YNL118C 2913 nt3.31□□□□□ -1.88
TY1B-HO13535 ERG25YGR060W 930 nt3.31□□□□□ -1.88
TY1B-HO13535 RRP5YMR229C 5190 nt3.31□□□□□ -1.88
TY1B-HO13535 SFB2YNL049C 2631 nt3.31□□□□□ -1.88
TY1B-HO13535 PTR3YFR029W 2037 nt3.31□□□□□ -1.88
TY1B-HO13535 HPR1YDR138W 2259 nt3.31□□□□□ -1.88
TY1B-HO13535 SIP3YNL257C 3690 nt3.3□□□□□ -1.88
TY1B-HO13535 SNF11YDR073W 510 nt3.3□□□□□ -1.88
TY1B-HO13535 YER039C-AYER039C-A 219 nt3.3□□□□□ -1.88
TY1B-HO13535 TAF4YMR005W 1167 nt3.3□□□□□ -1.88
TY1B-HO13535 SET6YPL165C 1122 nt3.3□□□□□ -1.88
TY1B-HO13535 MSS18YPR134W 807 nt3.3□□□□□ -1.88
TY1B-HO13535 LAP3YNL239W 1365 nt3.3□□□□□ -1.88
TY1B-HO13535 DOA4YDR069C 2781 nt3.3□□□□□ -1.88
TY1B-HO13535 CDH1YGL003C 1701 nt3.3□□□□□ -1.88
TY1B-HO13535 YIL092WYIL092W 1902 nt3.3□□□□□ -1.88
TY1B-HO13535 TFC3YAL001C 3483 nt3.3□□□□□ -1.88
TY1B-HO13535 SLM2YNL047C 1971 nt3.3□□□□□ -1.88
TY1B-HO13535 YOL098CYOL098C 3114 nt3.29□□□□□ -1.88
TY1B-HO13535 BET1YIL004C 429 nt3.29□□□□□ -1.88
TY1B-HO13535 TMC1YOR052C 453 nt3.29□□□□□ -1.88
TY1B-HO13535 RAS1YOR101W 930 nt3.29□□□□□ -1.88
TY1B-HO13535 FRM2YCL026C-A 582 nt3.29□□□□□ -1.88
TY1B-HO13535 ROM1YGR070W 3468 nt3.29□□□□□ -1.88
TY1B-HO13535 SSN2YDR443C 4263 nt3.29□□□□□ -1.88
TY1B-HO13535 KRE33YNL132W 3171 nt3.29□□□□□ -1.88
TY1B-HO13535 PUF6YDR496C 1971 nt3.28□□□□□ -1.88
TY1B-HO13535 VAC14YLR386W 2643 nt3.28□□□□□ -1.88
TY1B-HO13535 YER079C-AYER079C-A 339 nt3.28□□□□□ -1.88
TY1B-HO13535 YLR122CYLR122C 378 nt3.28□□□□□ -1.88
TY1B-HO13535 SAS5YOR213C 747 nt3.28□□□□□ -1.88
TY1B-HO13535 REB1YBR049C 2433 nt3.28□□□□□ -1.88
TY1B-HO13535 YDR535CYDR535C 501 nt3.28□□□□□ -1.89
TY1B-HO13535 FMP10YER182W 735 nt3.28□□□□□ -1.89
TY1B-HO13535 RPS23AYGR118W 438 nt3.28□□□□□ -1.89
TY1B-HO13535 RPS23BYPR132W 438 nt3.28□□□□□ -1.89
TY1B-HO13535 ESL1YIL151C 3357 nt3.28□□□□□ -1.89
TY1B-HO13535 RAD5YLR032W 3510 nt3.27□□□□□ -1.89
TY1B-HO13535 TAE2YPL009C 3117 nt3.27□□□□□ -1.89
TY1B-HO13535 SSF2YDR312W 1362 nt3.27□□□□□ -1.89
TY1B-HO13535 SYS1YJL004C 612 nt3.27□□□□□ -1.89
TY1B-HO13535 YBL065WYBL065W 345 nt3.27□□□□□ -1.89
TY1B-HO13535 SPF1YEL031W 3648 nt3.26□□□□□ -1.89
TY1B-HO13535 UNG1YML021C 1080 nt3.26□□□□□ -1.89
TY1B-HO13535 MF(ALPHA)1YPL187W 498 nt3.26□□□□□ -1.89
TY1B-HO13535 PIP2YOR363C 2991 nt3.26□□□□□ -1.89
TY1B-HO13535 COS4YFL062W 1140 nt3.25□□□□□ -1.89
TY1B-HO13535 NSE1YLR007W 1011 nt3.25□□□□□ -1.89
TY1B-HO13535 PBA1YLR199C 831 nt3.25□□□□□ -1.89
TY1B-HO13535 YBL005W-AYBL005W-A 1323 nt3.25□□□□□ -1.89
TY1B-HO13535 YMR046CYMR046C 1323 nt3.25□□□□□ -1.89
TY1B-HO13535 YLR302CYLR302C 363 nt3.25□□□□□ -1.89
TY1B-HO13535 IBD2YNL164C 1056 nt3.25□□□□□ -1.89
TY1B-HO13535 POL30YBR088C 777 nt3.25□□□□□ -1.89
TY1B-HO13535 BUD4YJR092W 4344 nt3.25□□□□□ -1.89
TY1B-HO13535 MSH4YFL003C 2637 nt3.24□□□□□ -1.89
TY1B-HO13535 FLO1YAR050W 4614 nt3.24□□□□□ -1.89
TY1B-HO13535 PST1YDR055W 1335 nt3.23□□□□□ -1.89
TY1B-HO13535 SSO2YMR183C 888 nt3.23□□□□□ -1.89
TY1B-HO13535 IDI1YPL117C 867 nt3.23□□□□□ -1.89
TY1B-HO13535 CTF4YPR135W 2784 nt3.23□□□□□ -1.89
TY1B-HO13535 SNM1YDR478W 597 nt3.23□□□□□ -1.89
TY1B-HO13535 YJL052C-AYJL052C-A 120 nt3.23□□□□□ -1.89
TY1B-HO13535 snR37snR37 386 nt3.23□□□□□ -1.89
TY1B-HO13535 RTT107YHR154W 3213 nt3.22□□□□□ -1.89
TY1B-HO13535 RPL17BYJL177W 555 nt3.22□□□□□ -1.89
TY1B-HO13535 SMP1YBR182C 1359 nt3.22□□□□□ -1.89
TY1B-HO13535 snR83snR83 306 nt3.21□□□□□ -1.9
TY1B-HO13535 CIR1YGR207C 786 nt3.21□□□□□ -1.9
TY1B-HO13535 APN2YBL019W 1563 nt3.21□□□□□ -1.9
TY1B-HO13535 RPO21YDL140C 5202 nt3.21□□□□□ -1.9
TY1B-HO13535 APL4YPR029C 2499 nt3.21□□□□□ -1.9
TY1B-HO13535 TAF6YGL112C 1551 nt3.2□□□□□ -1.9
TY1B-HO13535 YSP2YDR326C 4317 nt3.2□□□□□ -1.9
TY1B-HO13535 STE14YDR410C 720 nt3.2□□□□□ -1.9
TY1B-HO13535 ISC10YER180C 804 nt3.2□□□□□ -1.9
TY1B-HO13535 YKL131WYKL131W 522 nt3.2□□□□□ -1.9
TY1B-HO13535 KHA1YJL094C 2622 nt3.2□□□□□ -1.9
TY1B-HO13535 BNA4YBL098W 1383 nt3.2□□□□□ -1.9
TY1B-HO13535 EMI1YDR512C 564 nt3.2□□□□□ -1.9
TY1B-HO13535 RSM19YNR037C 276 nt3.2□□□□□ -1.9
TY1B-HO13535 RCY1YJL204C 2523 nt3.2□□□□□ -1.9
TY1B-HO13535 YDR261C-DYDR261C-D 4815 nt3.19□□□□□ -1.9
TY1B-HO13535 TOR1YJR066W 7413 nt3.19□□□□□ -1.9
TY1B-HO13535 YBR259WYBR259W 2067 nt3.19□□□□□ -1.9
TY1B-HO13535 PRP8YHR165C 7242 nt3.19□□□□□ -1.9
TY1B-HO13535 YLR154W-EYLR154W-E 204 nt3.19□□□□□ -1.9
TY1B-HO13535 PFY1YOR122C 381 nt3.19□□□□□ -1.9
TY1B-HO13535 MSN4YKL062W 1893 nt3.18□□□□□ -1.9
TY1B-HO13535 KAP95YLR347C 2586 nt3.18□□□□□ -1.9
TY1B-HO13535 YGL159WYGL159W 1113 nt3.18□□□□□ -1.9
TY1B-HO13535 YAR1YPL239W 603 nt3.18□□□□□ -1.9
TY1B-HO13535 WHI4YDL224C 1950 nt3.18□□□□□ -1.9
TY1B-HO13535 BUD2YKL092C 3315 nt3.17□□□□□ -1.9
TY1B-HO13535 SBE22YHR103W 2559 nt3.17□□□□□ -1.9
TY1B-HO13535 KAR5YMR065W 1515 nt3.17□□□□□ -1.9
TY1B-HO13535 YLR428CYLR428C 345 nt3.17□□□□□ -1.9
TY1B-HO13535 RFC5YBR087W 1065 nt3.17□□□□□ -1.9
TY1B-HO13535 SRS2YJL092W 3525 nt3.17□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 31.7 ms