Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CHCHD3Q9NX63 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHCHD3Q9NX63 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CHCHD3Q9NX63 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHCHD3Q9NX63 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
CHCHD3Q9NX63 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CHCHD3Q9NX63 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHCHD3Q9NX63 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHCHD3Q9NX63 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHCHD3Q9NX63 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHCHD3Q9NX63 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.76■□□□□ 0.75
CHCHD3Q9NX63 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHCHD3Q9NX63 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHCHD3Q9NX63 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.76■□□□□ 0.75
CHCHD3Q9NX63 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CHCHD3Q9NX63 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CHCHD3Q9NX63 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CHCHD3Q9NX63 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHCHD3Q9NX63 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CHCHD3Q9NX63 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHCHD3Q9NX63 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.76■□□□□ 0.75
CHCHD3Q9NX63 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHCHD3Q9NX63 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHCHD3Q9NX63 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.76■□□□□ 0.75
CHCHD3Q9NX63 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHCHD3Q9NX63 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.76■□□□□ 0.75
CHCHD3Q9NX63 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHCHD3Q9NX63 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CHCHD3Q9NX63 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHCHD3Q9NX63 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHCHD3Q9NX63 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.75■□□□□ 0.75
CHCHD3Q9NX63 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.75■□□□□ 0.75
CHCHD3Q9NX63 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHCHD3Q9NX63 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.75■□□□□ 0.75
CHCHD3Q9NX63 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.75■□□□□ 0.75
CHCHD3Q9NX63 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CHCHD3Q9NX63 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHCHD3Q9NX63 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHCHD3Q9NX63 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHCHD3Q9NX63 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHCHD3Q9NX63 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHCHD3Q9NX63 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHCHD3Q9NX63 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CHCHD3Q9NX63 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHCHD3Q9NX63 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.75■□□□□ 0.75
CHCHD3Q9NX63 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHCHD3Q9NX63 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CHCHD3Q9NX63 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.74■□□□□ 0.75
CHCHD3Q9NX63 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHCHD3Q9NX63 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.74■□□□□ 0.75
CHCHD3Q9NX63 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CHCHD3Q9NX63 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHCHD3Q9NX63 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHCHD3Q9NX63 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CHCHD3Q9NX63 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHCHD3Q9NX63 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.74■□□□□ 0.75
CHCHD3Q9NX63 RNF126P1-201ENST00000567452 1320 ntBASIC19.74■□□□□ 0.75
CHCHD3Q9NX63 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CHCHD3Q9NX63 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.73■□□□□ 0.75
CHCHD3Q9NX63 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHCHD3Q9NX63 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CHCHD3Q9NX63 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.73■□□□□ 0.75
CHCHD3Q9NX63 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHCHD3Q9NX63 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHCHD3Q9NX63 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CHCHD3Q9NX63 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHCHD3Q9NX63 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHCHD3Q9NX63 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.73■□□□□ 0.75
CHCHD3Q9NX63 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
CHCHD3Q9NX63 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.73■□□□□ 0.75
CHCHD3Q9NX63 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHCHD3Q9NX63 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHCHD3Q9NX63 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHCHD3Q9NX63 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHCHD3Q9NX63 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHCHD3Q9NX63 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CHCHD3Q9NX63 FAM99A-202ENST00000538190 1989 ntBASIC19.72■□□□□ 0.75
CHCHD3Q9NX63 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CHCHD3Q9NX63 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHCHD3Q9NX63 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHCHD3Q9NX63 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHCHD3Q9NX63 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.72■□□□□ 0.75
CHCHD3Q9NX63 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.72■□□□□ 0.75
CHCHD3Q9NX63 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHCHD3Q9NX63 AC144652.1-201ENST00000609974 1624 ntBASIC19.72■□□□□ 0.75
CHCHD3Q9NX63 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHCHD3Q9NX63 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHCHD3Q9NX63 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CHCHD3Q9NX63 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.72■□□□□ 0.75
CHCHD3Q9NX63 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHCHD3Q9NX63 AL157384.1-201ENST00000445995 2473 ntBASIC19.71■□□□□ 0.75
CHCHD3Q9NX63 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHCHD3Q9NX63 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.71■□□□□ 0.75
CHCHD3Q9NX63 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.71■□□□□ 0.75
CHCHD3Q9NX63 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHCHD3Q9NX63 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHCHD3Q9NX63 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHCHD3Q9NX63 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHCHD3Q9NX63 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.71■□□□□ 0.75
CHCHD3Q9NX63 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 1069 ms