Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
KRTAP4-1Q9BYQ7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC11.22□□□□□ -0.61
KRTAP4-1Q9BYQ7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC11.22□□□□□ -0.61
KRTAP4-1Q9BYQ7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC11.22□□□□□ -0.61
KRTAP4-1Q9BYQ7 RARRES2P4-201ENST00000514074 484 ntBASIC11.22□□□□□ -0.61
KRTAP4-1Q9BYQ7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
KRTAP4-1Q9BYQ7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
KRTAP4-1Q9BYQ7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP4-1Q9BYQ7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC11.21□□□□□ -0.61
KRTAP4-1Q9BYQ7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP4-1Q9BYQ7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
KRTAP4-1Q9BYQ7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP4-1Q9BYQ7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP4-1Q9BYQ7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC11.21□□□□□ -0.61
KRTAP4-1Q9BYQ7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC11.21□□□□□ -0.61
KRTAP4-1Q9BYQ7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
KRTAP4-1Q9BYQ7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP4-1Q9BYQ7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
KRTAP4-1Q9BYQ7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
KRTAP4-1Q9BYQ7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC11.21□□□□□ -0.61
KRTAP4-1Q9BYQ7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC11.21□□□□□ -0.61
KRTAP4-1Q9BYQ7 DUSP5P2-201ENST00000426873 1033 ntBASIC11.21□□□□□ -0.61
KRTAP4-1Q9BYQ7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC11.21□□□□□ -0.61
KRTAP4-1Q9BYQ7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
KRTAP4-1Q9BYQ7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC11.21□□□□□ -0.61
KRTAP4-1Q9BYQ7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC11.21□□□□□ -0.61
KRTAP4-1Q9BYQ7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC11.21□□□□□ -0.61
KRTAP4-1Q9BYQ7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
KRTAP4-1Q9BYQ7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC11.21□□□□□ -0.61
KRTAP4-1Q9BYQ7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC11.21□□□□□ -0.61
KRTAP4-1Q9BYQ7 MYC-209ENST00000641252 345 ntBASIC11.21□□□□□ -0.61
KRTAP4-1Q9BYQ7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
KRTAP4-1Q9BYQ7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
KRTAP4-1Q9BYQ7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC11.21□□□□□ -0.62
KRTAP4-1Q9BYQ7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
KRTAP4-1Q9BYQ7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
KRTAP4-1Q9BYQ7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
KRTAP4-1Q9BYQ7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
KRTAP4-1Q9BYQ7 AC092068.2-201ENST00000590491 1708 ntBASIC11.21□□□□□ -0.62
KRTAP4-1Q9BYQ7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
KRTAP4-1Q9BYQ7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP4-1Q9BYQ7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP4-1Q9BYQ7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP4-1Q9BYQ7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP4-1Q9BYQ7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP4-1Q9BYQ7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP4-1Q9BYQ7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP4-1Q9BYQ7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP4-1Q9BYQ7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP4-1Q9BYQ7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC11.2□□□□□ -0.62
KRTAP4-1Q9BYQ7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP4-1Q9BYQ7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
KRTAP4-1Q9BYQ7 BX276092.2-201ENST00000417668 665 ntBASIC11.2□□□□□ -0.62
KRTAP4-1Q9BYQ7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP4-1Q9BYQ7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC11.2□□□□□ -0.62
KRTAP4-1Q9BYQ7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC11.2□□□□□ -0.62
KRTAP4-1Q9BYQ7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC11.2□□□□□ -0.62
KRTAP4-1Q9BYQ7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
KRTAP4-1Q9BYQ7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC11.2□□□□□ -0.62
KRTAP4-1Q9BYQ7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
KRTAP4-1Q9BYQ7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP4-1Q9BYQ7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP4-1Q9BYQ7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP4-1Q9BYQ7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
KRTAP4-1Q9BYQ7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP4-1Q9BYQ7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC11.2□□□□□ -0.62
KRTAP4-1Q9BYQ7 AP006587.3-201ENST00000525742 1516 ntBASIC11.19□□□□□ -0.62
KRTAP4-1Q9BYQ7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP4-1Q9BYQ7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP4-1Q9BYQ7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP4-1Q9BYQ7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP4-1Q9BYQ7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP4-1Q9BYQ7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
KRTAP4-1Q9BYQ7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP4-1Q9BYQ7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC11.19□□□□□ -0.62
KRTAP4-1Q9BYQ7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC11.19□□□□□ -0.62
KRTAP4-1Q9BYQ7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC11.19□□□□□ -0.62
KRTAP4-1Q9BYQ7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC11.19□□□□□ -0.62
KRTAP4-1Q9BYQ7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP4-1Q9BYQ7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC11.19□□□□□ -0.62
KRTAP4-1Q9BYQ7 AC007322.4-201ENST00000509611 723 ntBASIC11.19□□□□□ -0.62
KRTAP4-1Q9BYQ7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC11.19□□□□□ -0.62
KRTAP4-1Q9BYQ7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC11.19□□□□□ -0.62
KRTAP4-1Q9BYQ7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC11.19□□□□□ -0.62
KRTAP4-1Q9BYQ7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC11.19□□□□□ -0.62
KRTAP4-1Q9BYQ7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP4-1Q9BYQ7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP4-1Q9BYQ7 AC053503.5-201ENST00000601508 636 ntBASIC11.19□□□□□ -0.62
KRTAP4-1Q9BYQ7 AC092118.2-201ENST00000613495 667 ntBASIC11.19□□□□□ -0.62
KRTAP4-1Q9BYQ7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
KRTAP4-1Q9BYQ7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC11.19□□□□□ -0.62
KRTAP4-1Q9BYQ7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP4-1Q9BYQ7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC11.19□□□□□ -0.62
KRTAP4-1Q9BYQ7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
KRTAP4-1Q9BYQ7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC11.18□□□□□ -0.62
KRTAP4-1Q9BYQ7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
KRTAP4-1Q9BYQ7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
KRTAP4-1Q9BYQ7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
KRTAP4-1Q9BYQ7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
KRTAP4-1Q9BYQ7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC11.18□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms