Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNAP47Q5SQN1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.75■□□□□ 0.91
SNAP47Q5SQN1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.75■□□□□ 0.91
SNAP47Q5SQN1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNAP47Q5SQN1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNAP47Q5SQN1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.75■□□□□ 0.91
SNAP47Q5SQN1 BID-214ENST00000617586 542 ntTSL 5 BASIC20.75■□□□□ 0.91
SNAP47Q5SQN1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNAP47Q5SQN1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNAP47Q5SQN1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SNAP47Q5SQN1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNAP47Q5SQN1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNAP47Q5SQN1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNAP47Q5SQN1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.74■□□□□ 0.91
SNAP47Q5SQN1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNAP47Q5SQN1 ID1-201ENST00000376105 1233 ntBASIC20.74■□□□□ 0.91
SNAP47Q5SQN1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SNAP47Q5SQN1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SNAP47Q5SQN1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SNAP47Q5SQN1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.74■□□□□ 0.91
SNAP47Q5SQN1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.74■□□□□ 0.91
SNAP47Q5SQN1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SNAP47Q5SQN1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNAP47Q5SQN1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.74■□□□□ 0.91
SNAP47Q5SQN1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNAP47Q5SQN1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNAP47Q5SQN1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SNAP47Q5SQN1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SNAP47Q5SQN1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNAP47Q5SQN1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.73■□□□□ 0.91
SNAP47Q5SQN1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNAP47Q5SQN1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.73■□□□□ 0.91
SNAP47Q5SQN1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.73■□□□□ 0.91
SNAP47Q5SQN1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.73■□□□□ 0.91
SNAP47Q5SQN1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.73■□□□□ 0.91
SNAP47Q5SQN1 AC073111.5-205ENST00000641717 521 ntBASIC20.73■□□□□ 0.91
SNAP47Q5SQN1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SNAP47Q5SQN1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SNAP47Q5SQN1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNAP47Q5SQN1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNAP47Q5SQN1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SNAP47Q5SQN1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNAP47Q5SQN1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNAP47Q5SQN1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.72■□□□□ 0.91
SNAP47Q5SQN1 DUSP8P5-201ENST00000422884 1815 ntBASIC20.72■□□□□ 0.91
SNAP47Q5SQN1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.72■□□□□ 0.91
SNAP47Q5SQN1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.72■□□□□ 0.91
SNAP47Q5SQN1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SNAP47Q5SQN1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SNAP47Q5SQN1 AC104187.1-201ENST00000607510 612 ntBASIC20.72■□□□□ 0.91
SNAP47Q5SQN1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.72■□□□□ 0.91
SNAP47Q5SQN1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SNAP47Q5SQN1 AP004607.7-201ENST00000527152 1677 ntBASIC20.72■□□□□ 0.91
SNAP47Q5SQN1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.72■□□□□ 0.91
SNAP47Q5SQN1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNAP47Q5SQN1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SNAP47Q5SQN1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNAP47Q5SQN1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNAP47Q5SQN1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SNAP47Q5SQN1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNAP47Q5SQN1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNAP47Q5SQN1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNAP47Q5SQN1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNAP47Q5SQN1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNAP47Q5SQN1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SNAP47Q5SQN1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.71■□□□□ 0.91
SNAP47Q5SQN1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SNAP47Q5SQN1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SNAP47Q5SQN1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SNAP47Q5SQN1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SNAP47Q5SQN1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNAP47Q5SQN1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.71■□□□□ 0.91
SNAP47Q5SQN1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.7■□□□□ 0.91
SNAP47Q5SQN1 OR7E47P-201ENST00000546390 1422 ntBASIC20.7■□□□□ 0.9
SNAP47Q5SQN1 KRT87P-202ENST00000534226 1464 ntBASIC20.7■□□□□ 0.9
SNAP47Q5SQN1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNAP47Q5SQN1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
SNAP47Q5SQN1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SNAP47Q5SQN1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.7■□□□□ 0.9
SNAP47Q5SQN1 CDCA4P2-201ENST00000441182 718 ntBASIC20.7■□□□□ 0.9
SNAP47Q5SQN1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SNAP47Q5SQN1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNAP47Q5SQN1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.7■□□□□ 0.9
SNAP47Q5SQN1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.7■□□□□ 0.9
SNAP47Q5SQN1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNAP47Q5SQN1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNAP47Q5SQN1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.7■□□□□ 0.9
SNAP47Q5SQN1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNAP47Q5SQN1 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.7■□□□□ 0.9
SNAP47Q5SQN1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNAP47Q5SQN1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNAP47Q5SQN1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.7■□□□□ 0.9
SNAP47Q5SQN1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNAP47Q5SQN1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.69■□□□□ 0.9
SNAP47Q5SQN1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SNAP47Q5SQN1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SNAP47Q5SQN1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SNAP47Q5SQN1 HLA-L-209ENST00000420110 1011 ntBASIC20.69■□□□□ 0.9
SNAP47Q5SQN1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNAP47Q5SQN1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms