Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
COL15A1P39059 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
COL15A1P39059 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
COL15A1P39059 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
COL15A1P39059 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC27.34■■□□□ 1.97
COL15A1P39059 AC013268.1-206ENST00000638368 961 ntBASIC27.34■■□□□ 1.97
COL15A1P39059 AC112229.1-201ENST00000639295 961 ntBASIC27.34■■□□□ 1.97
COL15A1P39059 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC27.34■■□□□ 1.97
COL15A1P39059 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC27.33■■□□□ 1.97
COL15A1P39059 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC27.33■■□□□ 1.97
COL15A1P39059 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
COL15A1P39059 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC27.33■■□□□ 1.97
COL15A1P39059 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
COL15A1P39059 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC27.33■■□□□ 1.97
COL15A1P39059 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
COL15A1P39059 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC27.33■■□□□ 1.97
COL15A1P39059 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
COL15A1P39059 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.96
COL15A1P39059 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
COL15A1P39059 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
COL15A1P39059 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
COL15A1P39059 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
COL15A1P39059 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC27.32■■□□□ 1.96
COL15A1P39059 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC27.32■■□□□ 1.96
COL15A1P39059 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
COL15A1P39059 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
COL15A1P39059 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC27.32■■□□□ 1.96
COL15A1P39059 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
COL15A1P39059 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
COL15A1P39059 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
COL15A1P39059 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
COL15A1P39059 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC27.31■■□□□ 1.96
COL15A1P39059 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC27.31■■□□□ 1.96
COL15A1P39059 TBCB-214ENST00000629269 413 ntTSL 5 BASIC27.31■■□□□ 1.96
COL15A1P39059 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
COL15A1P39059 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
COL15A1P39059 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
COL15A1P39059 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
COL15A1P39059 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
COL15A1P39059 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC27.3■■□□□ 1.96
COL15A1P39059 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC27.3■■□□□ 1.96
COL15A1P39059 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
COL15A1P39059 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC27.3■■□□□ 1.96
COL15A1P39059 EEF1DP3-203ENST00000566025 782 ntBASIC27.3■■□□□ 1.96
COL15A1P39059 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC27.3■■□□□ 1.96
COL15A1P39059 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
COL15A1P39059 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
COL15A1P39059 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC27.3■■□□□ 1.96
COL15A1P39059 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
COL15A1P39059 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
COL15A1P39059 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
COL15A1P39059 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC27.29■■□□□ 1.96
COL15A1P39059 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
COL15A1P39059 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
COL15A1P39059 NAA20-201ENST00000310450 920 ntTSL 2 BASIC27.29■■□□□ 1.96
COL15A1P39059 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
COL15A1P39059 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
COL15A1P39059 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
COL15A1P39059 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC27.29■■□□□ 1.96
COL15A1P39059 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC27.29■■□□□ 1.96
COL15A1P39059 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC27.29■■□□□ 1.96
COL15A1P39059 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC27.29■■□□□ 1.96
COL15A1P39059 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
COL15A1P39059 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
COL15A1P39059 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
COL15A1P39059 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
COL15A1P39059 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC27.28■■□□□ 1.96
COL15A1P39059 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
COL15A1P39059 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
COL15A1P39059 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
COL15A1P39059 MARS-234ENST00000630571 216 ntTSL 5 BASIC27.28■■□□□ 1.96
COL15A1P39059 MARS-235ENST00000630803 183 ntTSL 3 BASIC27.28■■□□□ 1.96
COL15A1P39059 AC068338.2-201ENST00000563278 1430 ntBASIC27.28■■□□□ 1.96
COL15A1P39059 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC27.28■■□□□ 1.96
COL15A1P39059 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC27.28■■□□□ 1.96
COL15A1P39059 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC27.28■■□□□ 1.96
COL15A1P39059 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
COL15A1P39059 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC27.27■■□□□ 1.96
COL15A1P39059 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
COL15A1P39059 FAM201B-201ENST00000458407 597 ntBASIC27.27■■□□□ 1.96
COL15A1P39059 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC27.27■■□□□ 1.96
COL15A1P39059 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC27.27■■□□□ 1.96
COL15A1P39059 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC27.27■■□□□ 1.96
COL15A1P39059 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
COL15A1P39059 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC27.26■■□□□ 1.96
COL15A1P39059 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
COL15A1P39059 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
COL15A1P39059 BMP1-204ENST00000397814 836 ntTSL 4 BASIC27.26■■□□□ 1.95
COL15A1P39059 TERF1P5-201ENST00000477545 1207 ntBASIC27.26■■□□□ 1.95
COL15A1P39059 AC007322.4-201ENST00000509611 723 ntBASIC27.26■■□□□ 1.95
COL15A1P39059 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC27.26■■□□□ 1.95
COL15A1P39059 SLC7A5P1-201ENST00000568957 537 ntBASIC27.26■■□□□ 1.95
COL15A1P39059 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
COL15A1P39059 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
COL15A1P39059 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
COL15A1P39059 AP006587.3-201ENST00000525742 1516 ntBASIC27.26■■□□□ 1.95
COL15A1P39059 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
COL15A1P39059 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
COL15A1P39059 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC27.26■■□□□ 1.95
COL15A1P39059 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms