Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
BLOC1S4Q9NUP1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
BLOC1S4Q9NUP1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.99■■□□□ 1.43
BLOC1S4Q9NUP1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
BLOC1S4Q9NUP1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
BLOC1S4Q9NUP1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
BLOC1S4Q9NUP1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
BLOC1S4Q9NUP1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
BLOC1S4Q9NUP1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.99■■□□□ 1.43
BLOC1S4Q9NUP1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.99■■□□□ 1.43
BLOC1S4Q9NUP1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.99■■□□□ 1.43
BLOC1S4Q9NUP1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.99■■□□□ 1.43
BLOC1S4Q9NUP1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
BLOC1S4Q9NUP1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
BLOC1S4Q9NUP1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
BLOC1S4Q9NUP1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
BLOC1S4Q9NUP1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
BLOC1S4Q9NUP1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
BLOC1S4Q9NUP1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
BLOC1S4Q9NUP1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
BLOC1S4Q9NUP1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
BLOC1S4Q9NUP1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.98■■□□□ 1.43
BLOC1S4Q9NUP1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
BLOC1S4Q9NUP1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.98■■□□□ 1.43
BLOC1S4Q9NUP1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
BLOC1S4Q9NUP1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.98■■□□□ 1.43
BLOC1S4Q9NUP1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
BLOC1S4Q9NUP1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
BLOC1S4Q9NUP1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
BLOC1S4Q9NUP1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
BLOC1S4Q9NUP1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
BLOC1S4Q9NUP1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
BLOC1S4Q9NUP1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
BLOC1S4Q9NUP1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
BLOC1S4Q9NUP1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.97■■□□□ 1.43
BLOC1S4Q9NUP1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.97■■□□□ 1.43
BLOC1S4Q9NUP1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.97■■□□□ 1.43
BLOC1S4Q9NUP1 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.96■■□□□ 1.43
BLOC1S4Q9NUP1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.96■■□□□ 1.43
BLOC1S4Q9NUP1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
BLOC1S4Q9NUP1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
BLOC1S4Q9NUP1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
BLOC1S4Q9NUP1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
BLOC1S4Q9NUP1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
BLOC1S4Q9NUP1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
BLOC1S4Q9NUP1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.96■■□□□ 1.43
BLOC1S4Q9NUP1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.96■■□□□ 1.43
BLOC1S4Q9NUP1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
BLOC1S4Q9NUP1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
BLOC1S4Q9NUP1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.96■■□□□ 1.43
BLOC1S4Q9NUP1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
BLOC1S4Q9NUP1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.96■■□□□ 1.43
BLOC1S4Q9NUP1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.96■■□□□ 1.43
BLOC1S4Q9NUP1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.96■■□□□ 1.43
BLOC1S4Q9NUP1 AL034346.1-201ENST00000568244 1277 ntBASIC23.96■■□□□ 1.43
BLOC1S4Q9NUP1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.96■■□□□ 1.43
BLOC1S4Q9NUP1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
BLOC1S4Q9NUP1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
BLOC1S4Q9NUP1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.96■■□□□ 1.43
BLOC1S4Q9NUP1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.96■■□□□ 1.43
BLOC1S4Q9NUP1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
BLOC1S4Q9NUP1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
BLOC1S4Q9NUP1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
BLOC1S4Q9NUP1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
BLOC1S4Q9NUP1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
BLOC1S4Q9NUP1 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.95■■□□□ 1.42
BLOC1S4Q9NUP1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
BLOC1S4Q9NUP1 AC012414.1-201ENST00000556676 535 ntBASIC23.95■■□□□ 1.42
BLOC1S4Q9NUP1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
BLOC1S4Q9NUP1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.95■■□□□ 1.42
BLOC1S4Q9NUP1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
BLOC1S4Q9NUP1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.94■■□□□ 1.42
BLOC1S4Q9NUP1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
BLOC1S4Q9NUP1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.94■■□□□ 1.42
BLOC1S4Q9NUP1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.94■■□□□ 1.42
BLOC1S4Q9NUP1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
BLOC1S4Q9NUP1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
BLOC1S4Q9NUP1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
BLOC1S4Q9NUP1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
BLOC1S4Q9NUP1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
BLOC1S4Q9NUP1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.93■■□□□ 1.42
BLOC1S4Q9NUP1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
BLOC1S4Q9NUP1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
BLOC1S4Q9NUP1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.93■■□□□ 1.42
BLOC1S4Q9NUP1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
BLOC1S4Q9NUP1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
BLOC1S4Q9NUP1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
BLOC1S4Q9NUP1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
BLOC1S4Q9NUP1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
BLOC1S4Q9NUP1 AP006587.3-201ENST00000525742 1516 ntBASIC23.93■■□□□ 1.42
BLOC1S4Q9NUP1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
BLOC1S4Q9NUP1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
BLOC1S4Q9NUP1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.93■■□□□ 1.42
BLOC1S4Q9NUP1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
BLOC1S4Q9NUP1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.92■■□□□ 1.42
BLOC1S4Q9NUP1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.92■■□□□ 1.42
BLOC1S4Q9NUP1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
BLOC1S4Q9NUP1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.92■■□□□ 1.42
BLOC1S4Q9NUP1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.92■■□□□ 1.42
BLOC1S4Q9NUP1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms