Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD4Q9H0A8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD4Q9H0A8 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
COMMD4Q9H0A8 MIR4787-201ENST00000607364 84 ntBASIC18.91■□□□□ 0.62
COMMD4Q9H0A8 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD4Q9H0A8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD4Q9H0A8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD4Q9H0A8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD4Q9H0A8 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.91■□□□□ 0.62
COMMD4Q9H0A8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
COMMD4Q9H0A8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD4Q9H0A8 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD4Q9H0A8 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD4Q9H0A8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD4Q9H0A8 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD4Q9H0A8 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.9■□□□□ 0.62
COMMD4Q9H0A8 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD4Q9H0A8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD4Q9H0A8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD4Q9H0A8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD4Q9H0A8 RARRES2P1-201ENST00000474487 481 ntBASIC18.9■□□□□ 0.62
COMMD4Q9H0A8 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
COMMD4Q9H0A8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD4Q9H0A8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD4Q9H0A8 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
COMMD4Q9H0A8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COMMD4Q9H0A8 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COMMD4Q9H0A8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COMMD4Q9H0A8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.89■□□□□ 0.61
COMMD4Q9H0A8 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COMMD4Q9H0A8 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COMMD4Q9H0A8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
COMMD4Q9H0A8 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COMMD4Q9H0A8 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COMMD4Q9H0A8 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
COMMD4Q9H0A8 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
COMMD4Q9H0A8 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
COMMD4Q9H0A8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.89■□□□□ 0.61
COMMD4Q9H0A8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
COMMD4Q9H0A8 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD4Q9H0A8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD4Q9H0A8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD4Q9H0A8 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
COMMD4Q9H0A8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.88■□□□□ 0.61
COMMD4Q9H0A8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.88■□□□□ 0.61
COMMD4Q9H0A8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.88■□□□□ 0.61
COMMD4Q9H0A8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.88■□□□□ 0.61
COMMD4Q9H0A8 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD4Q9H0A8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD4Q9H0A8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD4Q9H0A8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.88■□□□□ 0.61
COMMD4Q9H0A8 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD4Q9H0A8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD4Q9H0A8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD4Q9H0A8 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD4Q9H0A8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD4Q9H0A8 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD4Q9H0A8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.87■□□□□ 0.61
COMMD4Q9H0A8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.87■□□□□ 0.61
COMMD4Q9H0A8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD4Q9H0A8 AC079089.2-201ENST00000531211 1277 ntBASIC18.87■□□□□ 0.61
COMMD4Q9H0A8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.87■□□□□ 0.61
COMMD4Q9H0A8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD4Q9H0A8 AC104564.3-201ENST00000582367 638 ntBASIC18.87■□□□□ 0.61
COMMD4Q9H0A8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD4Q9H0A8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.87■□□□□ 0.61
COMMD4Q9H0A8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
COMMD4Q9H0A8 AC241377.3-202ENST00000626088 1088 ntBASIC18.87■□□□□ 0.61
COMMD4Q9H0A8 AC241585.3-202ENST00000628937 1088 ntBASIC18.87■□□□□ 0.61
COMMD4Q9H0A8 AC245100.8-202ENST00000629247 1058 ntBASIC18.87■□□□□ 0.61
COMMD4Q9H0A8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD4Q9H0A8 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD4Q9H0A8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD4Q9H0A8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD4Q9H0A8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.86■□□□□ 0.61
COMMD4Q9H0A8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
COMMD4Q9H0A8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD4Q9H0A8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD4Q9H0A8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD4Q9H0A8 TSPY9P-201ENST00000440215 945 ntBASIC18.86■□□□□ 0.61
COMMD4Q9H0A8 TSPY11P-201ENST00000442607 1045 ntBASIC18.86■□□□□ 0.61
COMMD4Q9H0A8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.86■□□□□ 0.61
COMMD4Q9H0A8 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
COMMD4Q9H0A8 AL117332.1-201ENST00000622628 974 ntBASIC18.86■□□□□ 0.61
COMMD4Q9H0A8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD4Q9H0A8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD4Q9H0A8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD4Q9H0A8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD4Q9H0A8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.86■□□□□ 0.61
COMMD4Q9H0A8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD4Q9H0A8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD4Q9H0A8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD4Q9H0A8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD4Q9H0A8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD4Q9H0A8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
COMMD4Q9H0A8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.85■□□□□ 0.61
COMMD4Q9H0A8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD4Q9H0A8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
COMMD4Q9H0A8 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
COMMD4Q9H0A8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms