Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.21■□□□□ 0.83
SIMC1Q8NDZ2 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SIMC1Q8NDZ2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.2■□□□□ 0.82
SIMC1Q8NDZ2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SIMC1Q8NDZ2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.2■□□□□ 0.82
SIMC1Q8NDZ2 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIMC1Q8NDZ2 AC091305.1-201ENST00000479476 895 ntBASIC20.2■□□□□ 0.82
SIMC1Q8NDZ2 IGHV3-19-201ENST00000521488 291 ntBASIC20.2■□□□□ 0.82
SIMC1Q8NDZ2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.2■□□□□ 0.82
SIMC1Q8NDZ2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SIMC1Q8NDZ2 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.2■□□□□ 0.82
SIMC1Q8NDZ2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SIMC1Q8NDZ2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIMC1Q8NDZ2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.2■□□□□ 0.82
SIMC1Q8NDZ2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIMC1Q8NDZ2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIMC1Q8NDZ2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.2■□□□□ 0.82
SIMC1Q8NDZ2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIMC1Q8NDZ2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIMC1Q8NDZ2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SIMC1Q8NDZ2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SIMC1Q8NDZ2 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.19■□□□□ 0.82
SIMC1Q8NDZ2 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SIMC1Q8NDZ2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SIMC1Q8NDZ2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.19■□□□□ 0.82
SIMC1Q8NDZ2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.19■□□□□ 0.82
SIMC1Q8NDZ2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.19■□□□□ 0.82
SIMC1Q8NDZ2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SIMC1Q8NDZ2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SIMC1Q8NDZ2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SIMC1Q8NDZ2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SIMC1Q8NDZ2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.18■□□□□ 0.82
SIMC1Q8NDZ2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SIMC1Q8NDZ2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SIMC1Q8NDZ2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SIMC1Q8NDZ2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SIMC1Q8NDZ2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.18■□□□□ 0.82
SIMC1Q8NDZ2 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SIMC1Q8NDZ2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.18■□□□□ 0.82
SIMC1Q8NDZ2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SIMC1Q8NDZ2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SIMC1Q8NDZ2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SIMC1Q8NDZ2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.18■□□□□ 0.82
SIMC1Q8NDZ2 AC087239.1-201ENST00000622671 572 ntBASIC20.18■□□□□ 0.82
SIMC1Q8NDZ2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.18■□□□□ 0.82
SIMC1Q8NDZ2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SIMC1Q8NDZ2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SIMC1Q8NDZ2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SIMC1Q8NDZ2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SIMC1Q8NDZ2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SIMC1Q8NDZ2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SIMC1Q8NDZ2 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SIMC1Q8NDZ2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.17■□□□□ 0.82
SIMC1Q8NDZ2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SIMC1Q8NDZ2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SIMC1Q8NDZ2 C11orf96-202ENST00000528572 1834 ntBASIC20.17■□□□□ 0.82
SIMC1Q8NDZ2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.17■□□□□ 0.82
SIMC1Q8NDZ2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SIMC1Q8NDZ2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SIMC1Q8NDZ2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SIMC1Q8NDZ2 AC026471.6-201ENST00000622954 1905 ntBASIC20.17■□□□□ 0.82
SIMC1Q8NDZ2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.17■□□□□ 0.82
SIMC1Q8NDZ2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SIMC1Q8NDZ2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.16■□□□□ 0.82
SIMC1Q8NDZ2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.16■□□□□ 0.82
SIMC1Q8NDZ2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SIMC1Q8NDZ2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SIMC1Q8NDZ2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.16■□□□□ 0.82
SIMC1Q8NDZ2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SIMC1Q8NDZ2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.16■□□□□ 0.82
SIMC1Q8NDZ2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SIMC1Q8NDZ2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SIMC1Q8NDZ2 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SIMC1Q8NDZ2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SIMC1Q8NDZ2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SIMC1Q8NDZ2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SIMC1Q8NDZ2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SIMC1Q8NDZ2 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SIMC1Q8NDZ2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SIMC1Q8NDZ2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.15■□□□□ 0.82
SIMC1Q8NDZ2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SIMC1Q8NDZ2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SIMC1Q8NDZ2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.15■□□□□ 0.82
SIMC1Q8NDZ2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SIMC1Q8NDZ2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.15■□□□□ 0.82
SIMC1Q8NDZ2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.15■□□□□ 0.82
SIMC1Q8NDZ2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SIMC1Q8NDZ2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SIMC1Q8NDZ2 OR7E47P-201ENST00000546390 1422 ntBASIC20.15■□□□□ 0.82
SIMC1Q8NDZ2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SIMC1Q8NDZ2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SIMC1Q8NDZ2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SIMC1Q8NDZ2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SIMC1Q8NDZ2 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SIMC1Q8NDZ2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SIMC1Q8NDZ2 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SIMC1Q8NDZ2 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SIMC1Q8NDZ2 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SIMC1Q8NDZ2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SIMC1Q8NDZ2 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms