Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.24■□□□□ 0.99
LYSMD4Q5XG99 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.24■□□□□ 0.99
LYSMD4Q5XG99 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.24■□□□□ 0.99
LYSMD4Q5XG99 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.23■□□□□ 0.99
LYSMD4Q5XG99 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LYSMD4Q5XG99 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.23■□□□□ 0.99
LYSMD4Q5XG99 AL034346.1-201ENST00000568244 1277 ntBASIC21.23■□□□□ 0.99
LYSMD4Q5XG99 AC008694.1-202ENST00000636953 945 ntBASIC21.23■□□□□ 0.99
LYSMD4Q5XG99 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
LYSMD4Q5XG99 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.23■□□□□ 0.99
LYSMD4Q5XG99 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
LYSMD4Q5XG99 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LYSMD4Q5XG99 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LYSMD4Q5XG99 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LYSMD4Q5XG99 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.23■□□□□ 0.99
LYSMD4Q5XG99 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LYSMD4Q5XG99 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LYSMD4Q5XG99 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LYSMD4Q5XG99 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LYSMD4Q5XG99 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LYSMD4Q5XG99 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.22■□□□□ 0.99
LYSMD4Q5XG99 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
LYSMD4Q5XG99 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.22■□□□□ 0.99
LYSMD4Q5XG99 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
LYSMD4Q5XG99 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LYSMD4Q5XG99 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
LYSMD4Q5XG99 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LYSMD4Q5XG99 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
LYSMD4Q5XG99 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LYSMD4Q5XG99 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.22■□□□□ 0.99
LYSMD4Q5XG99 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LYSMD4Q5XG99 AC007322.4-201ENST00000509611 723 ntBASIC21.22■□□□□ 0.99
LYSMD4Q5XG99 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.22■□□□□ 0.99
LYSMD4Q5XG99 OR10C1-204ENST00000622521 1039 ntBASIC21.22■□□□□ 0.99
LYSMD4Q5XG99 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.22■□□□□ 0.99
LYSMD4Q5XG99 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LYSMD4Q5XG99 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
LYSMD4Q5XG99 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.21■□□□□ 0.99
LYSMD4Q5XG99 OR7E47P-201ENST00000546390 1422 ntBASIC21.21■□□□□ 0.99
LYSMD4Q5XG99 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LYSMD4Q5XG99 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
LYSMD4Q5XG99 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
LYSMD4Q5XG99 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
LYSMD4Q5XG99 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LYSMD4Q5XG99 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.21■□□□□ 0.99
LYSMD4Q5XG99 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LYSMD4Q5XG99 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.21■□□□□ 0.99
LYSMD4Q5XG99 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.21■□□□□ 0.99
LYSMD4Q5XG99 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.21■□□□□ 0.99
LYSMD4Q5XG99 EEF1DP3-203ENST00000566025 782 ntBASIC21.21■□□□□ 0.99
LYSMD4Q5XG99 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.21■□□□□ 0.99
LYSMD4Q5XG99 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
LYSMD4Q5XG99 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
LYSMD4Q5XG99 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.21■□□□□ 0.99
LYSMD4Q5XG99 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.21■□□□□ 0.99
LYSMD4Q5XG99 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.21■□□□□ 0.99
LYSMD4Q5XG99 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.21■□□□□ 0.99
LYSMD4Q5XG99 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LYSMD4Q5XG99 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.2■□□□□ 0.99
LYSMD4Q5XG99 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.2■□□□□ 0.98
LYSMD4Q5XG99 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
LYSMD4Q5XG99 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
LYSMD4Q5XG99 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LYSMD4Q5XG99 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LYSMD4Q5XG99 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LYSMD4Q5XG99 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.2■□□□□ 0.98
LYSMD4Q5XG99 AC069236.1-201ENST00000604339 616 ntBASIC21.2■□□□□ 0.98
LYSMD4Q5XG99 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
LYSMD4Q5XG99 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LYSMD4Q5XG99 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LYSMD4Q5XG99 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
LYSMD4Q5XG99 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LYSMD4Q5XG99 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LYSMD4Q5XG99 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LYSMD4Q5XG99 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LYSMD4Q5XG99 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LYSMD4Q5XG99 AC053503.5-201ENST00000601508 636 ntBASIC21.19■□□□□ 0.98
LYSMD4Q5XG99 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LYSMD4Q5XG99 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
LYSMD4Q5XG99 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
LYSMD4Q5XG99 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.18■□□□□ 0.98
LYSMD4Q5XG99 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LYSMD4Q5XG99 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LYSMD4Q5XG99 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.18■□□□□ 0.98
LYSMD4Q5XG99 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.18■□□□□ 0.98
LYSMD4Q5XG99 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
LYSMD4Q5XG99 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LYSMD4Q5XG99 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
LYSMD4Q5XG99 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LYSMD4Q5XG99 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
LYSMD4Q5XG99 AC092118.2-201ENST00000613495 667 ntBASIC21.18■□□□□ 0.98
LYSMD4Q5XG99 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
LYSMD4Q5XG99 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LYSMD4Q5XG99 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LYSMD4Q5XG99 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LYSMD4Q5XG99 PRORSD1P-201ENST00000295112 541 ntBASIC21.17■□□□□ 0.98
LYSMD4Q5XG99 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.17■□□□□ 0.98
LYSMD4Q5XG99 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.17■□□□□ 0.98
LYSMD4Q5XG99 AC016405.3-201ENST00000607710 860 ntBASIC21.17■□□□□ 0.98
LYSMD4Q5XG99 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 278.5 ms