Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 ELM1YKL048C 1923 nt4.13□□□□□ -1.75
RPN11P43588 Q0255Q0255 1419 nt4.12□□□□□ -1.75
RPN11P43588 AVT1YJR001W 1809 nt4.12□□□□□ -1.75
RPN11P43588 PAM1YDR251W 2493 nt4.12□□□□□ -1.75
RPN11P43588 SWP82YFL049W 1872 nt4.12□□□□□ -1.75
RPN11P43588 PEA2YER149C 1263 nt4.12□□□□□ -1.75
RPN11P43588 END3YNL084C 1050 nt4.12□□□□□ -1.75
RPN11P43588 TIR2YOR010C 756 nt4.12□□□□□ -1.75
RPN11P43588 RFM1YOR279C 933 nt4.12□□□□□ -1.75
RPN11P43588 RSE1YML049C 4086 nt4.12□□□□□ -1.75
RPN11P43588 SRS2YJL092W 3525 nt4.12□□□□□ -1.75
RPN11P43588 GAC1YOR178C 2382 nt4.11□□□□□ -1.75
RPN11P43588 GPR1YDL035C 2886 nt4.11□□□□□ -1.75
RPN11P43588 YGR111WYGR111W 1203 nt4.11□□□□□ -1.75
RPN11P43588 YJL218WYJL218W 591 nt4.11□□□□□ -1.75
RPN11P43588 YMR085WYMR085W 1299 nt4.11□□□□□ -1.75
RPN11P43588 YOL107WYOL107W 1029 nt4.11□□□□□ -1.75
RPN11P43588 ICS2YBR157C 768 nt4.11□□□□□ -1.75
RPN11P43588 OM14YBR230C 405 nt4.11□□□□□ -1.75
RPN11P43588 STP22YCL008C 1158 nt4.11□□□□□ -1.75
RPN11P43588 YRB30YGL164C 1323 nt4.11□□□□□ -1.75
RPN11P43588 DHR2YKL078W 2208 nt4.11□□□□□ -1.75
RPN11P43588 STV1YMR054W 2673 nt4.11□□□□□ -1.75
RPN11P43588 ARG5,6YER069W 2592 nt4.1□□□□□ -1.75
RPN11P43588 PCA1YBR295W 3651 nt4.1□□□□□ -1.75
RPN11P43588 MAL12YGR292W 1755 nt4.1□□□□□ -1.75
RPN11P43588 APP1YNL094W 1764 nt4.1□□□□□ -1.75
RPN11P43588 MAL32YBR299W 1755 nt4.1□□□□□ -1.75
RPN11P43588 OAF1YAL051W 3144 nt4.1□□□□□ -1.75
RPN11P43588 RPS11AYDR025W 471 nt4.1□□□□□ -1.75
RPN11P43588 KXD1YGL079W 657 nt4.1□□□□□ -1.75
RPN11P43588 LIP2YLR239C 987 nt4.1□□□□□ -1.75
RPN11P43588 GPN3YLR243W 819 nt4.1□□□□□ -1.75
RPN11P43588 RPC34YNR003C 954 nt4.1□□□□□ -1.75
RPN11P43588 PFK27YOL136C 1194 nt4.1□□□□□ -1.75
RPN11P43588 ARO4YBR249C 1113 nt4.1□□□□□ -1.75
RPN11P43588 YNR066CYNR066C 1311 nt4.1□□□□□ -1.75
RPN11P43588 CDC6YJL194W 1542 nt4.1□□□□□ -1.75
RPN11P43588 CTR86YCR054C 1692 nt4.1□□□□□ -1.75
RPN11P43588 GLN4YOR168W 2430 nt4.09□□□□□ -1.75
RPN11P43588 SNU23YDL098C 585 nt4.09□□□□□ -1.75
RPN11P43588 YFR057WYFR057W 456 nt4.09□□□□□ -1.75
RPN11P43588 CWC23YGL128C 852 nt4.09□□□□□ -1.75
RPN11P43588 YGL204CYGL204C 306 nt4.09□□□□□ -1.75
RPN11P43588 SAE3YHR079C-A 276 nt4.09□□□□□ -1.75
RPN11P43588 AUR1YKL004W 1206 nt4.09□□□□□ -1.75
RPN11P43588 MTR2YKL186C 555 nt4.09□□□□□ -1.75
RPN11P43588 YML119WYML119W 1074 nt4.09□□□□□ -1.75
RPN11P43588 YOR331CYOR331C 558 nt4.09□□□□□ -1.75
RPN11P43588 CCL1YPR025C 1182 nt4.09□□□□□ -1.75
RPN11P43588 TAZ1YPR140W 1146 nt4.09□□□□□ -1.75
RPN11P43588 CET1YPL228W 1650 nt4.09□□□□□ -1.76
RPN11P43588 RPL35BYDL136W 363 nt4.08□□□□□ -1.76
RPN11P43588 PHO13YDL236W 939 nt4.08□□□□□ -1.76
RPN11P43588 COM2YER130C 1332 nt4.08□□□□□ -1.76
RPN11P43588 RPL22BYFL034C-A 369 nt4.08□□□□□ -1.76
RPN11P43588 MDM30YLR368W 1797 nt4.08□□□□□ -1.76
RPN11P43588 MED11YMR112C 396 nt4.08□□□□□ -1.76
RPN11P43588 RUF5-1RUF5-1 710 nt4.08□□□□□ -1.76
RPN11P43588 RUF5-2RUF5-2 710 nt4.08□□□□□ -1.76
RPN11P43588 NOP4YPL043W 2058 nt4.08□□□□□ -1.76
RPN11P43588 ATG5YPL149W 885 nt4.08□□□□□ -1.76
RPN11P43588 CUE3YGL110C 1875 nt4.07□□□□□ -1.76
RPN11P43588 VAC7YNL054W 3498 nt4.07□□□□□ -1.76
RPN11P43588 GYP6YJL044C 1377 nt4.07□□□□□ -1.76
RPN11P43588 YEL050W-AYEL050W-A 192 nt4.07□□□□□ -1.76
RPN11P43588 PFS1YHR185C 714 nt4.07□□□□□ -1.76
RPN11P43588 RFA3YJL173C 369 nt4.07□□□□□ -1.76
RPN11P43588 TMA10YLR327C 261 nt4.07□□□□□ -1.76
RPN11P43588 CCW14YLR390W-A 717 nt4.07□□□□□ -1.76
RPN11P43588 TMC1YOR052C 453 nt4.07□□□□□ -1.76
RPN11P43588 GRX5YPL059W 453 nt4.07□□□□□ -1.76
RPN11P43588 RPS11BYBR048W 471 nt4.07□□□□□ -1.76
RPN11P43588 KIC1YHR102W 3243 nt4.07□□□□□ -1.76
RPN11P43588 BUB1YGR188C 3066 nt4.07□□□□□ -1.76
RPN11P43588 YVC1YOR087W 2028 nt4.07□□□□□ -1.76
RPN11P43588 RPB2YOR151C 3675 nt4.06□□□□□ -1.76
RPN11P43588 NEM1YHR004C 1341 nt4.06□□□□□ -1.76
RPN11P43588 SYF1YDR416W 2580 nt4.06□□□□□ -1.76
RPN11P43588 YHL049CYHL049C 816 nt4.06□□□□□ -1.76
RPN11P43588 YIL156W-AYIL156W-A 402 nt4.06□□□□□ -1.76
RPN11P43588 PSF2YJL072C 642 nt4.06□□□□□ -1.76
RPN11P43588 CSM3YMR048W 954 nt4.06□□□□□ -1.76
RPN11P43588 RIM9YMR063W 720 nt4.06□□□□□ -1.76
RPN11P43588 SRT1YMR101C 1032 nt4.06□□□□□ -1.76
RPN11P43588 DUG3YNL191W 1074 nt4.06□□□□□ -1.76
RPN11P43588 BUD27YFL023W 2391 nt4.06□□□□□ -1.76
RPN11P43588 PLM2YDR501W 1566 nt4.06□□□□□ -1.76
RPN11P43588 IMD4YML056C 1575 nt4.06□□□□□ -1.76
RPN11P43588 URC2YDR520C 2319 nt4.05□□□□□ -1.76
RPN11P43588 YIG1YPL201C 1386 nt4.05□□□□□ -1.76
RPN11P43588 RPN9YDR427W 1182 nt4.05□□□□□ -1.76
RPN11P43588 RPL34AYER056C-A 366 nt4.05□□□□□ -1.76
RPN11P43588 YGL108CYGL108C 423 nt4.05□□□□□ -1.76
RPN11P43588 CAP2YIL034C 864 nt4.05□□□□□ -1.76
RPN11P43588 FIP1YJR093C 984 nt4.05□□□□□ -1.76
RPN11P43588 TRI1YMR233W 681 nt4.05□□□□□ -1.76
RPN11P43588 IPP1YBR011C 864 nt4.05□□□□□ -1.76
RPN11P43588 HSH49YOR319W 642 nt4.05□□□□□ -1.76
RPN11P43588 YPR027CYPR027C 834 nt4.05□□□□□ -1.76
Retrieved 100 of 7,029 protein–RNA pairs in 24.9 ms