Protein–RNA interactions for Protein: P38353

SSH1, Sec sixty-one protein homolog, yeastyeast

Known RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH1P38353 YGR027W-BYGR027W-B 5268 nt2.94□□□□□ -1.94
SSH1P38353 YLR227W-BYLR227W-B 5268 nt2.94□□□□□ -1.94
SSH1P38353 YPR158C-DYPR158C-D 5268 nt2.94□□□□□ -1.94
SSH1P38353 TRE2YOR256C 2430 nt2.94□□□□□ -1.94
SSH1P38353 GPI13YLL031C 3054 nt2.94□□□□□ -1.94
SSH1P38353 CHA4YLR098C 1947 nt2.93□□□□□ -1.94
SSH1P38353 YMR1YJR110W 2067 nt2.93□□□□□ -1.94
SSH1P38353 EDC1YGL222C 528 nt2.93□□□□□ -1.94
SSH1P38353 ECM4YKR076W 1113 nt2.93□□□□□ -1.94
SSH1P38353 YNL320WYNL320W 855 nt2.93□□□□□ -1.94
SSH1P38353 YBR096WYBR096W 693 nt2.93□□□□□ -1.94
SSH1P38353 YBR242WYBR242W 717 nt2.93□□□□□ -1.94
SSH1P38353 CCM1YGR150C 2595 nt2.93□□□□□ -1.94
SSH1P38353 MEF1YLR069C 2286 nt2.93□□□□□ -1.94
SSH1P38353 YBR238CYBR238C 2196 nt2.93□□□□□ -1.94
SSH1P38353 NDT80YHR124W 1884 nt2.92□□□□□ -1.94
SSH1P38353 FAS1YKL182W 6156 nt2.92□□□□□ -1.94
SSH1P38353 YAT2YER024W 2772 nt2.92□□□□□ -1.94
SSH1P38353 snR63snR63 255 nt2.92□□□□□ -1.94
SSH1P38353 TOS8YGL096W 831 nt2.92□□□□□ -1.94
SSH1P38353 RPS23AYGR118W 438 nt2.92□□□□□ -1.94
SSH1P38353 RPS21AYKR057W 264 nt2.92□□□□□ -1.94
SSH1P38353 MSA2YKR077W 1092 nt2.92□□□□□ -1.94
SSH1P38353 RPL22AYLR061W 366 nt2.92□□□□□ -1.94
SSH1P38353 YLR444CYLR444C 303 nt2.92□□□□□ -1.94
SSH1P38353 YNL013CYNL013C 378 nt2.92□□□□□ -1.94
SSH1P38353 YOR082CYOR082C 342 nt2.92□□□□□ -1.94
SSH1P38353 YBR053CYBR053C 1077 nt2.92□□□□□ -1.94
SSH1P38353 RPS23BYPR132W 438 nt2.92□□□□□ -1.94
SSH1P38353 SMC2YFR031C 3513 nt2.92□□□□□ -1.94
SSH1P38353 MIC60YKR016W 1623 nt2.92□□□□□ -1.94
SSH1P38353 POL2YNL262W 6669 nt2.92□□□□□ -1.94
SSH1P38353 YHR202WYHR202W 1809 nt2.91□□□□□ -1.94
SSH1P38353 GWT1YJL091C 1473 nt2.91□□□□□ -1.94
SSH1P38353 MED2YDL005C 1296 nt2.91□□□□□ -1.94
SSH1P38353 SHU2YDR078C 672 nt2.91□□□□□ -1.94
SSH1P38353 GRX3YDR098C 858 nt2.91□□□□□ -1.94
SSH1P38353 HIM1YDR317W 1245 nt2.91□□□□□ -1.94
SSH1P38353 WBP1YEL002C 1293 nt2.91□□□□□ -1.94
SSH1P38353 VMA8YEL051W 771 nt2.91□□□□□ -1.94
SSH1P38353 YGL082WYGL082W 1146 nt2.91□□□□□ -1.94
SSH1P38353 YGL214WYGL214W 486 nt2.91□□□□□ -1.94
SSH1P38353 UAF30YOR295W 687 nt2.91□□□□□ -1.94
SSH1P38353 MRPL37YBR268W 318 nt2.91□□□□□ -1.94
SSH1P38353 REC8YPR007C 2043 nt2.91□□□□□ -1.94
SSH1P38353 YFL040WYFL040W 1623 nt2.9□□□□□ -1.94
SSH1P38353 HRT3YLR097C 1035 nt2.9□□□□□ -1.95
SSH1P38353 SSU72YNL222W 621 nt2.9□□□□□ -1.95
SSH1P38353 RFM1YOR279C 933 nt2.9□□□□□ -1.95
SSH1P38353 YHR080CYHR080C 4038 nt2.9□□□□□ -1.95
SSH1P38353 PRM15YMR278W 1869 nt2.89□□□□□ -1.95
SSH1P38353 INN1YNL152W 1230 nt2.89□□□□□ -1.95
SSH1P38353 RPS11BYBR048W 471 nt2.89□□□□□ -1.95
SSH1P38353 USV1YPL230W 1176 nt2.89□□□□□ -1.95
SSH1P38353 CSR2YPR030W 3366 nt2.89□□□□□ -1.95
SSH1P38353 PHO5YBR093C 1404 nt2.89□□□□□ -1.95
SSH1P38353 YSP2YDR326C 4317 nt2.89□□□□□ -1.95
SSH1P38353 FRE2YKL220C 2136 nt2.89□□□□□ -1.95
SSH1P38353 MIG1YGL035C 1515 nt2.88□□□□□ -1.95
SSH1P38353 CIN8YEL061C 3003 nt2.88□□□□□ -1.95
SSH1P38353 YKR015CYKR015C 1707 nt2.88□□□□□ -1.95
SSH1P38353 CHK1YBR274W 1584 nt2.88□□□□□ -1.95
SSH1P38353 TPD3YAL016W 1908 nt2.88□□□□□ -1.95
SSH1P38353 YCR085WYCR085W 354 nt2.88□□□□□ -1.95
SSH1P38353 SCL1YGL011C 759 nt2.88□□□□□ -1.95
SSH1P38353 GOT1YMR292W 417 nt2.88□□□□□ -1.95
SSH1P38353 RRG9YNL213C 645 nt2.88□□□□□ -1.95
SSH1P38353 HSH49YOR319W 642 nt2.88□□□□□ -1.95
SSH1P38353 DIB1YPR082C 432 nt2.88□□□□□ -1.95
SSH1P38353 DAP2YHR028C 2457 nt2.88□□□□□ -1.95
SSH1P38353 VTC4YJL012C 2166 nt2.88□□□□□ -1.95
SSH1P38353 PST1YDR055W 1335 nt2.88□□□□□ -1.95
SSH1P38353 YPR148CYPR148C 1308 nt2.88□□□□□ -1.95
SSH1P38353 CLG1YGL215W 1359 nt2.87□□□□□ -1.95
SSH1P38353 YJR111CYJR111C 852 nt2.87□□□□□ -1.95
SSH1P38353 BUR2YLR226W 1188 nt2.87□□□□□ -1.95
SSH1P38353 MRPS17YMR188C 714 nt2.87□□□□□ -1.95
SSH1P38353 RUF5-1RUF5-1 710 nt2.87□□□□□ -1.95
SSH1P38353 RUF5-2RUF5-2 710 nt2.87□□□□□ -1.95
SSH1P38353 CMD1YBR109C 444 nt2.87□□□□□ -1.95
SSH1P38353 FLO1YAR050W 4614 nt2.87□□□□□ -1.95
SSH1P38353 MAL12YGR292W 1755 nt2.87□□□□□ -1.95
SSH1P38353 MAL32YBR299W 1755 nt2.87□□□□□ -1.95
SSH1P38353 PTM1YKL039W 1572 nt2.87□□□□□ -1.95
SSH1P38353 YDL176WYDL176W 2127 nt2.86□□□□□ -1.95
SSH1P38353 ISM1YPL040C 3009 nt2.86□□□□□ -1.95
SSH1P38353 ACA1YER045C 1470 nt2.86□□□□□ -1.95
SSH1P38353 RSN1YMR266W 2862 nt2.86□□□□□ -1.95
SSH1P38353 RPS29BYDL061C 171 nt2.86□□□□□ -1.95
SSH1P38353 YDL162CYDL162C 357 nt2.86□□□□□ -1.95
SSH1P38353 FRQ1YDR373W 573 nt2.86□□□□□ -1.95
SSH1P38353 YBL081WYBL081W 1107 nt2.86□□□□□ -1.95
SSH1P38353 YBL096CYBL096C 309 nt2.86□□□□□ -1.95
SSH1P38353 CYC2YOR037W 1101 nt2.86□□□□□ -1.95
SSH1P38353 snR34snR34 203 nt2.86□□□□□ -1.95
SSH1P38353 EXO5YBR163W 1758 nt2.86□□□□□ -1.95
SSH1P38353 STP1YDR463W 1560 nt2.86□□□□□ -1.95
SSH1P38353 VPS33YLR396C 2076 nt2.86□□□□□ -1.95
SSH1P38353 ARP4YJL081C 1470 nt2.85□□□□□ -1.95
SSH1P38353 YNR063WYNR063W 1824 nt2.85□□□□□ -1.95
Retrieved 100 of 7,029 protein–RNA pairs in 71.1 ms