Protein–RNA interactions for Protein: P11586

MTHFD1, C-1-tetrahydrofolate synthase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1P11586 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.2■□□□□ 0.98
MTHFD1P11586 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.2■□□□□ 0.98
MTHFD1P11586 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.98
MTHFD1P11586 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
MTHFD1P11586 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MTHFD1P11586 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MTHFD1P11586 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.2■□□□□ 0.98
MTHFD1P11586 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MTHFD1P11586 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MTHFD1P11586 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
MTHFD1P11586 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.19■□□□□ 0.98
MTHFD1P11586 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
MTHFD1P11586 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MTHFD1P11586 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.19■□□□□ 0.98
MTHFD1P11586 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MTHFD1P11586 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.19■□□□□ 0.98
MTHFD1P11586 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
MTHFD1P11586 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.18■□□□□ 0.98
MTHFD1P11586 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MTHFD1P11586 AL137060.1-201ENST00000618151 2648 ntBASIC21.18■□□□□ 0.98
MTHFD1P11586 YBX1P1-201ENST00000445822 960 ntBASIC21.18■□□□□ 0.98
MTHFD1P11586 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.18■□□□□ 0.98
MTHFD1P11586 SMUG1P1-201ENST00000590640 811 ntBASIC21.18■□□□□ 0.98
MTHFD1P11586 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MTHFD1P11586 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
MTHFD1P11586 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MTHFD1P11586 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MTHFD1P11586 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.17■□□□□ 0.98
MTHFD1P11586 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
MTHFD1P11586 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MTHFD1P11586 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MTHFD1P11586 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.17■□□□□ 0.98
MTHFD1P11586 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.17■□□□□ 0.98
MTHFD1P11586 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.17■□□□□ 0.98
MTHFD1P11586 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.17■□□□□ 0.98
MTHFD1P11586 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MTHFD1P11586 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MTHFD1P11586 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MTHFD1P11586 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
MTHFD1P11586 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.17■□□□□ 0.98
MTHFD1P11586 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MTHFD1P11586 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MTHFD1P11586 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MTHFD1P11586 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
MTHFD1P11586 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
MTHFD1P11586 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
MTHFD1P11586 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MTHFD1P11586 ESRRAP2-201ENST00000418437 1549 ntBASIC21.16■□□□□ 0.98
MTHFD1P11586 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MTHFD1P11586 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
MTHFD1P11586 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MTHFD1P11586 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MTHFD1P11586 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MTHFD1P11586 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.16■□□□□ 0.98
MTHFD1P11586 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.16■□□□□ 0.98
MTHFD1P11586 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.16■□□□□ 0.98
MTHFD1P11586 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.16■□□□□ 0.98
MTHFD1P11586 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MTHFD1P11586 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MTHFD1P11586 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
MTHFD1P11586 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MTHFD1P11586 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.16■□□□□ 0.98
MTHFD1P11586 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MTHFD1P11586 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MTHFD1P11586 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MTHFD1P11586 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MTHFD1P11586 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MTHFD1P11586 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
MTHFD1P11586 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.15■□□□□ 0.98
MTHFD1P11586 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.15■□□□□ 0.98
MTHFD1P11586 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.15■□□□□ 0.98
MTHFD1P11586 AC087623.3-201ENST00000607047 1098 ntBASIC21.15■□□□□ 0.98
MTHFD1P11586 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MTHFD1P11586 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MTHFD1P11586 AC087742.1-201ENST00000575880 1738 ntBASIC21.15■□□□□ 0.98
MTHFD1P11586 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
MTHFD1P11586 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MTHFD1P11586 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MTHFD1P11586 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
MTHFD1P11586 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
MTHFD1P11586 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
MTHFD1P11586 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
MTHFD1P11586 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
MTHFD1P11586 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MTHFD1P11586 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
MTHFD1P11586 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MTHFD1P11586 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MTHFD1P11586 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MTHFD1P11586 AC123595.1-201ENST00000440769 1046 ntBASIC21.14■□□□□ 0.97
MTHFD1P11586 AC079089.2-201ENST00000531211 1277 ntBASIC21.14■□□□□ 0.97
MTHFD1P11586 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.14■□□□□ 0.97
MTHFD1P11586 MIR5787-201ENST00000611784 55 ntBASIC21.14■□□□□ 0.97
MTHFD1P11586 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
MTHFD1P11586 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MTHFD1P11586 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
MTHFD1P11586 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MTHFD1P11586 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MTHFD1P11586 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MTHFD1P11586 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MTHFD1P11586 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms