Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.99■□□□□ 0.95
EBF4Q9BQW3 AC092667.1-201ENST00000434301 2586 ntBASIC20.99■□□□□ 0.95
EBF4Q9BQW3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EBF4Q9BQW3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.99■□□□□ 0.95
EBF4Q9BQW3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.98■□□□□ 0.95
EBF4Q9BQW3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.98■□□□□ 0.95
EBF4Q9BQW3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EBF4Q9BQW3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.98■□□□□ 0.95
EBF4Q9BQW3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.98■□□□□ 0.95
EBF4Q9BQW3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EBF4Q9BQW3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EBF4Q9BQW3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
EBF4Q9BQW3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
EBF4Q9BQW3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
EBF4Q9BQW3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
EBF4Q9BQW3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
EBF4Q9BQW3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.97■□□□□ 0.95
EBF4Q9BQW3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.97■□□□□ 0.95
EBF4Q9BQW3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
EBF4Q9BQW3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EBF4Q9BQW3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.97■□□□□ 0.95
EBF4Q9BQW3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.97■□□□□ 0.95
EBF4Q9BQW3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.97■□□□□ 0.95
EBF4Q9BQW3 KRT8P33-201ENST00000508125 1423 ntBASIC20.96■□□□□ 0.95
EBF4Q9BQW3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EBF4Q9BQW3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EBF4Q9BQW3 LINC01006-201ENST00000333319 2292 ntBASIC20.96■□□□□ 0.95
EBF4Q9BQW3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EBF4Q9BQW3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.96■□□□□ 0.95
EBF4Q9BQW3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
EBF4Q9BQW3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.96■□□□□ 0.95
EBF4Q9BQW3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EBF4Q9BQW3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.96■□□□□ 0.95
EBF4Q9BQW3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EBF4Q9BQW3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
EBF4Q9BQW3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
EBF4Q9BQW3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EBF4Q9BQW3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
EBF4Q9BQW3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.96■□□□□ 0.95
EBF4Q9BQW3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EBF4Q9BQW3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
EBF4Q9BQW3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
EBF4Q9BQW3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
EBF4Q9BQW3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EBF4Q9BQW3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
EBF4Q9BQW3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EBF4Q9BQW3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EBF4Q9BQW3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.95■□□□□ 0.94
EBF4Q9BQW3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
EBF4Q9BQW3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.95■□□□□ 0.94
EBF4Q9BQW3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EBF4Q9BQW3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.95■□□□□ 0.94
EBF4Q9BQW3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EBF4Q9BQW3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
EBF4Q9BQW3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EBF4Q9BQW3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
EBF4Q9BQW3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
EBF4Q9BQW3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.95■□□□□ 0.94
EBF4Q9BQW3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
EBF4Q9BQW3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EBF4Q9BQW3 C17orf82-201ENST00000623772 1530 ntBASIC20.94■□□□□ 0.94
EBF4Q9BQW3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EBF4Q9BQW3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
EBF4Q9BQW3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EBF4Q9BQW3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.94■□□□□ 0.94
EBF4Q9BQW3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EBF4Q9BQW3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EBF4Q9BQW3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.94■□□□□ 0.94
EBF4Q9BQW3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EBF4Q9BQW3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.94■□□□□ 0.94
EBF4Q9BQW3 AC021242.3-201ENST00000607598 1377 ntBASIC20.94■□□□□ 0.94
EBF4Q9BQW3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
EBF4Q9BQW3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EBF4Q9BQW3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
EBF4Q9BQW3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
EBF4Q9BQW3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.93■□□□□ 0.94
EBF4Q9BQW3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EBF4Q9BQW3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
EBF4Q9BQW3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
EBF4Q9BQW3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
EBF4Q9BQW3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.93■□□□□ 0.94
EBF4Q9BQW3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
EBF4Q9BQW3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
EBF4Q9BQW3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.93■□□□□ 0.94
EBF4Q9BQW3 AL121603.2-201ENST00000557373 2117 ntBASIC20.93■□□□□ 0.94
EBF4Q9BQW3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
EBF4Q9BQW3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.93■□□□□ 0.94
EBF4Q9BQW3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EBF4Q9BQW3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EBF4Q9BQW3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
EBF4Q9BQW3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.92■□□□□ 0.94
EBF4Q9BQW3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.92■□□□□ 0.94
EBF4Q9BQW3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EBF4Q9BQW3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.92■□□□□ 0.94
EBF4Q9BQW3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.92■□□□□ 0.94
EBF4Q9BQW3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
EBF4Q9BQW3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
EBF4Q9BQW3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
EBF4Q9BQW3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
EBF4Q9BQW3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms