Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
CDC42BPAQ5VT25 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
CDC42BPAQ5VT25 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC33.05■■■□□ 2.88
CDC42BPAQ5VT25 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC33.05■■■□□ 2.88
CDC42BPAQ5VT25 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC33.05■■■□□ 2.88
CDC42BPAQ5VT25 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC33.05■■■□□ 2.88
CDC42BPAQ5VT25 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC33.05■■■□□ 2.88
CDC42BPAQ5VT25 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
CDC42BPAQ5VT25 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
CDC42BPAQ5VT25 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
CDC42BPAQ5VT25 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC33.05■■■□□ 2.88
CDC42BPAQ5VT25 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC33.05■■■□□ 2.88
CDC42BPAQ5VT25 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC33.05■■■□□ 2.88
CDC42BPAQ5VT25 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC33.05■■■□□ 2.88
CDC42BPAQ5VT25 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
CDC42BPAQ5VT25 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC33.04■■■□□ 2.88
CDC42BPAQ5VT25 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
CDC42BPAQ5VT25 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
CDC42BPAQ5VT25 AC073210.2-201ENST00000430369 194 ntBASIC33.04■■■□□ 2.88
CDC42BPAQ5VT25 AC007322.4-201ENST00000509611 723 ntBASIC33.04■■■□□ 2.88
CDC42BPAQ5VT25 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC33.04■■■□□ 2.88
CDC42BPAQ5VT25 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
CDC42BPAQ5VT25 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC33.03■■■□□ 2.88
CDC42BPAQ5VT25 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC33.03■■■□□ 2.88
CDC42BPAQ5VT25 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
CDC42BPAQ5VT25 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
CDC42BPAQ5VT25 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC33.03■■■□□ 2.88
CDC42BPAQ5VT25 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC33.03■■■□□ 2.88
CDC42BPAQ5VT25 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC33.03■■■□□ 2.88
CDC42BPAQ5VT25 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC33.02■■■□□ 2.88
CDC42BPAQ5VT25 AL034346.1-201ENST00000568244 1277 ntBASIC33.02■■■□□ 2.88
CDC42BPAQ5VT25 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC33.02■■■□□ 2.88
CDC42BPAQ5VT25 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC33.02■■■□□ 2.88
CDC42BPAQ5VT25 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC33.02■■■□□ 2.88
CDC42BPAQ5VT25 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
CDC42BPAQ5VT25 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC33.01■■■□□ 2.87
CDC42BPAQ5VT25 FXN-202ENST00000396364 980 ntTSL 5 BASIC33.01■■■□□ 2.87
CDC42BPAQ5VT25 RGMA-211ENST00000557420 989 ntTSL 3 BASIC33.01■■■□□ 2.87
CDC42BPAQ5VT25 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC33.01■■■□□ 2.87
CDC42BPAQ5VT25 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC33.01■■■□□ 2.87
CDC42BPAQ5VT25 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC33.01■■■□□ 2.87
CDC42BPAQ5VT25 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC33.01■■■□□ 2.87
CDC42BPAQ5VT25 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC33■■■□□ 2.87
CDC42BPAQ5VT25 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC33■■■□□ 2.87
CDC42BPAQ5VT25 NAA20-201ENST00000310450 920 ntTSL 2 BASIC33■■■□□ 2.87
CDC42BPAQ5VT25 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CDC42BPAQ5VT25 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC33■■■□□ 2.87
CDC42BPAQ5VT25 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC33■■■□□ 2.87
CDC42BPAQ5VT25 LINC00526-201ENST00000581067 1875 ntBASIC33■■■□□ 2.87
CDC42BPAQ5VT25 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CDC42BPAQ5VT25 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CDC42BPAQ5VT25 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC33■■■□□ 2.87
CDC42BPAQ5VT25 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC33■■■□□ 2.87
CDC42BPAQ5VT25 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CDC42BPAQ5VT25 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
CDC42BPAQ5VT25 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
CDC42BPAQ5VT25 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC32.99■■■□□ 2.87
CDC42BPAQ5VT25 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
CDC42BPAQ5VT25 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
CDC42BPAQ5VT25 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC32.99■■■□□ 2.87
CDC42BPAQ5VT25 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC32.99■■■□□ 2.87
CDC42BPAQ5VT25 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC32.99■■■□□ 2.87
CDC42BPAQ5VT25 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC32.99■■■□□ 2.87
CDC42BPAQ5VT25 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
CDC42BPAQ5VT25 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
CDC42BPAQ5VT25 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
CDC42BPAQ5VT25 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC32.98■■■□□ 2.87
CDC42BPAQ5VT25 AC068338.2-201ENST00000563278 1430 ntBASIC32.98■■■□□ 2.87
CDC42BPAQ5VT25 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC32.98■■■□□ 2.87
CDC42BPAQ5VT25 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
CDC42BPAQ5VT25 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC32.98■■■□□ 2.87
CDC42BPAQ5VT25 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
CDC42BPAQ5VT25 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
CDC42BPAQ5VT25 PHB2-213ENST00000546111 858 ntTSL 2 BASIC32.97■■■□□ 2.87
CDC42BPAQ5VT25 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC32.97■■■□□ 2.87
CDC42BPAQ5VT25 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
CDC42BPAQ5VT25 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
CDC42BPAQ5VT25 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
CDC42BPAQ5VT25 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC32.96■■■□□ 2.87
CDC42BPAQ5VT25 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
CDC42BPAQ5VT25 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
CDC42BPAQ5VT25 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC32.96■■■□□ 2.87
CDC42BPAQ5VT25 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC32.96■■■□□ 2.87
CDC42BPAQ5VT25 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC32.96■■■□□ 2.87
CDC42BPAQ5VT25 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
CDC42BPAQ5VT25 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC32.95■■■□□ 2.87
CDC42BPAQ5VT25 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC32.95■■■□□ 2.87
CDC42BPAQ5VT25 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC32.95■■■□□ 2.87
CDC42BPAQ5VT25 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
CDC42BPAQ5VT25 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
CDC42BPAQ5VT25 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC32.95■■■□□ 2.86
CDC42BPAQ5VT25 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC32.94■■■□□ 2.86
CDC42BPAQ5VT25 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
CDC42BPAQ5VT25 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC32.94■■■□□ 2.86
CDC42BPAQ5VT25 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC32.94■■■□□ 2.86
CDC42BPAQ5VT25 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC32.94■■■□□ 2.86
CDC42BPAQ5VT25 PFKL-212ENST00000628044 129 ntTSL 3 BASIC32.94■■■□□ 2.86
CDC42BPAQ5VT25 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC32.94■■■□□ 2.86
CDC42BPAQ5VT25 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
CDC42BPAQ5VT25 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms