Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 BX842568.3-201ENST00000418104 571 ntBASIC18.7■□□□□ 0.58
SNAI3Q3KNW1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNAI3Q3KNW1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNAI3Q3KNW1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNAI3Q3KNW1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNAI3Q3KNW1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNAI3Q3KNW1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNAI3Q3KNW1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SNAI3Q3KNW1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.69■□□□□ 0.58
SNAI3Q3KNW1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
SNAI3Q3KNW1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNAI3Q3KNW1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.69■□□□□ 0.58
SNAI3Q3KNW1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.69■□□□□ 0.58
SNAI3Q3KNW1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNAI3Q3KNW1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.69■□□□□ 0.58
SNAI3Q3KNW1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.69■□□□□ 0.58
SNAI3Q3KNW1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNAI3Q3KNW1 AC007375.3-201ENST00000600936 2314 ntBASIC18.69■□□□□ 0.58
SNAI3Q3KNW1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNAI3Q3KNW1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNAI3Q3KNW1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.69■□□□□ 0.58
SNAI3Q3KNW1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNAI3Q3KNW1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNAI3Q3KNW1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNAI3Q3KNW1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SNAI3Q3KNW1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNAI3Q3KNW1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
SNAI3Q3KNW1 PBX2P1-201ENST00000493219 1291 ntBASIC18.68■□□□□ 0.58
SNAI3Q3KNW1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.68■□□□□ 0.58
SNAI3Q3KNW1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SNAI3Q3KNW1 AC026471.6-201ENST00000622954 1905 ntBASIC18.68■□□□□ 0.58
SNAI3Q3KNW1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.67■□□□□ 0.58
SNAI3Q3KNW1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.67■□□□□ 0.58
SNAI3Q3KNW1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNAI3Q3KNW1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNAI3Q3KNW1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNAI3Q3KNW1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNAI3Q3KNW1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNAI3Q3KNW1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.67■□□□□ 0.58
SNAI3Q3KNW1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.67■□□□□ 0.58
SNAI3Q3KNW1 AC233992.3-201ENST00000607491 485 ntBASIC18.67■□□□□ 0.58
SNAI3Q3KNW1 AC110285.6-201ENST00000617652 491 ntBASIC18.67■□□□□ 0.58
SNAI3Q3KNW1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNAI3Q3KNW1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.67■□□□□ 0.58
SNAI3Q3KNW1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNAI3Q3KNW1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNAI3Q3KNW1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNAI3Q3KNW1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNAI3Q3KNW1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNAI3Q3KNW1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.66■□□□□ 0.58
SNAI3Q3KNW1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNAI3Q3KNW1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNAI3Q3KNW1 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.66■□□□□ 0.58
SNAI3Q3KNW1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.66■□□□□ 0.58
SNAI3Q3KNW1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNAI3Q3KNW1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNAI3Q3KNW1 AC106739.1-201ENST00000617035 715 ntBASIC18.66■□□□□ 0.58
SNAI3Q3KNW1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.66■□□□□ 0.58
SNAI3Q3KNW1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SNAI3Q3KNW1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNAI3Q3KNW1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SNAI3Q3KNW1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNAI3Q3KNW1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNAI3Q3KNW1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.65■□□□□ 0.58
SNAI3Q3KNW1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNAI3Q3KNW1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNAI3Q3KNW1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNAI3Q3KNW1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNAI3Q3KNW1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.65■□□□□ 0.58
SNAI3Q3KNW1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNAI3Q3KNW1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.65■□□□□ 0.58
SNAI3Q3KNW1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.65■□□□□ 0.58
SNAI3Q3KNW1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNAI3Q3KNW1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.65■□□□□ 0.58
SNAI3Q3KNW1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.65■□□□□ 0.58
SNAI3Q3KNW1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.65■□□□□ 0.58
SNAI3Q3KNW1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNAI3Q3KNW1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNAI3Q3KNW1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNAI3Q3KNW1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
SNAI3Q3KNW1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNAI3Q3KNW1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
SNAI3Q3KNW1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNAI3Q3KNW1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNAI3Q3KNW1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.64■□□□□ 0.57
SNAI3Q3KNW1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.64■□□□□ 0.57
SNAI3Q3KNW1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.64■□□□□ 0.57
SNAI3Q3KNW1 AC126544.1-201ENST00000580842 1059 ntBASIC18.64■□□□□ 0.57
SNAI3Q3KNW1 AC008764.7-201ENST00000593779 1081 ntBASIC18.64■□□□□ 0.57
SNAI3Q3KNW1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNAI3Q3KNW1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SNAI3Q3KNW1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNAI3Q3KNW1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.64■□□□□ 0.57
SNAI3Q3KNW1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SNAI3Q3KNW1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNAI3Q3KNW1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.64■□□□□ 0.57
SNAI3Q3KNW1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNAI3Q3KNW1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNAI3Q3KNW1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.63■□□□□ 0.57
SNAI3Q3KNW1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms