Protein–RNA interactions for Protein: P0CX61

TY2A-F, Transposon Ty2-F Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-FP0CX61 snR11snR11 258 nt3.99□□□□□ -1.77
TY2A-FP0CX61 RSC3YDR303C 2658 nt3.99□□□□□ -1.77
TY2A-FP0CX61 SPC105YGL093W 2754 nt3.99□□□□□ -1.77
TY2A-FP0CX61 FRT2YAL028W 1587 nt3.98□□□□□ -1.77
TY2A-FP0CX61 PEX30YLR324W 1572 nt3.98□□□□□ -1.77
TY2A-FP0CX61 RGI1YER067W 486 nt3.98□□□□□ -1.77
TY2A-FP0CX61 OST5YGL226C-A 261 nt3.98□□□□□ -1.77
TY2A-FP0CX61 YGR190CYGR190C 366 nt3.98□□□□□ -1.77
TY2A-FP0CX61 YJL156W-AYJL156W-A 222 nt3.98□□□□□ -1.77
TY2A-FP0CX61 YJR096WYJR096W 849 nt3.98□□□□□ -1.77
TY2A-FP0CX61 SFH1YLR321C 1281 nt3.98□□□□□ -1.77
TY2A-FP0CX61 YML053CYML053C 639 nt3.98□□□□□ -1.77
TY2A-FP0CX61 HNT3YOR258W 654 nt3.98□□□□□ -1.77
TY2A-FP0CX61 HOYDL227C 1761 nt3.98□□□□□ -1.77
TY2A-FP0CX61 GDE1YPL110C 3672 nt3.98□□□□□ -1.77
TY2A-FP0CX61 GSM1YJL103C 1857 nt3.97□□□□□ -1.77
TY2A-FP0CX61 RUB1YDR139C 234 nt3.97□□□□□ -1.77
TY2A-FP0CX61 CWC23YGL128C 852 nt3.97□□□□□ -1.77
TY2A-FP0CX61 BTN2YGR142W 1233 nt3.97□□□□□ -1.77
TY2A-FP0CX61 SVP26YHR181W 687 nt3.97□□□□□ -1.77
TY2A-FP0CX61 SUI1YNL244C 327 nt3.97□□□□□ -1.77
TY2A-FP0CX61 RPS10AYOR293W 318 nt3.97□□□□□ -1.77
TY2A-FP0CX61 FDH2YPL275W 711 nt3.97□□□□□ -1.77
TY2A-FP0CX61 PBN1YCL052C 1251 nt3.97□□□□□ -1.77
TY2A-FP0CX61 MSK1YNL073W 1731 nt3.97□□□□□ -1.77
TY2A-FP0CX61 MDM34YGL219C 1380 nt3.97□□□□□ -1.77
TY2A-FP0CX61 SSU1YPL092W 1377 nt3.97□□□□□ -1.77
TY2A-FP0CX61 BUD5YCR038C 1929 nt3.97□□□□□ -1.77
TY2A-FP0CX61 YPR148CYPR148C 1308 nt3.96□□□□□ -1.77
TY2A-FP0CX61 ULP1YPL020C 1866 nt3.96□□□□□ -1.77
TY2A-FP0CX61 ARP9YMR033W 1404 nt3.96□□□□□ -1.77
TY2A-FP0CX61 MIG1YGL035C 1515 nt3.96□□□□□ -1.78
TY2A-FP0CX61 XKS1YGR194C 1803 nt3.96□□□□□ -1.78
TY2A-FP0CX61 YDL094CYDL094C 510 nt3.96□□□□□ -1.78
TY2A-FP0CX61 YGL041W-AYGL041W-A 465 nt3.96□□□□□ -1.78
TY2A-FP0CX61 YGL242CYGL242C 546 nt3.96□□□□□ -1.78
TY2A-FP0CX61 MAK16YAL025C 921 nt3.96□□□□□ -1.78
TY2A-FP0CX61 YJR038CYJR038C 363 nt3.96□□□□□ -1.78
TY2A-FP0CX61 GLO1YML004C 981 nt3.96□□□□□ -1.78
TY2A-FP0CX61 RUF5-1RUF5-1 710 nt3.96□□□□□ -1.78
TY2A-FP0CX61 RUF5-2RUF5-2 710 nt3.96□□□□□ -1.78
TY2A-FP0CX61 PRM4YPL156C 855 nt3.96□□□□□ -1.78
TY2A-FP0CX61 YPL162CYPL162C 822 nt3.96□□□□□ -1.78
TY2A-FP0CX61 SPH1YLR313C 1593 nt3.96□□□□□ -1.78
TY2A-FP0CX61 CIT1YNR001C 1440 nt3.95□□□□□ -1.78
TY2A-FP0CX61 UTP5YDR398W 1932 nt3.95□□□□□ -1.78
TY2A-FP0CX61 APA2YDR530C 978 nt3.95□□□□□ -1.78
TY2A-FP0CX61 BUD25YER014C-A 462 nt3.95□□□□□ -1.78
TY2A-FP0CX61 MMF1YIL051C 438 nt3.95□□□□□ -1.78
TY2A-FP0CX61 GLG2YJL137C 1143 nt3.95□□□□□ -1.78
TY2A-FP0CX61 YLL037WYLL037W 381 nt3.95□□□□□ -1.78
TY2A-FP0CX61 PAM18YLR008C 507 nt3.95□□□□□ -1.78
TY2A-FP0CX61 SIL1YOL031C 1266 nt3.95□□□□□ -1.78
TY2A-FP0CX61 CBP3YPL215W 1008 nt3.95□□□□□ -1.78
TY2A-FP0CX61 DSS4YPR017C 432 nt3.95□□□□□ -1.78
TY2A-FP0CX61 CBP6YBR120C 489 nt3.95□□□□□ -1.78
TY2A-FP0CX61 MED8YBR193C 672 nt3.95□□□□□ -1.78
TY2A-FP0CX61 VPS45YGL095C 1734 nt3.95□□□□□ -1.78
TY2A-FP0CX61 UTP25YIL091C 2166 nt3.95□□□□□ -1.78
TY2A-FP0CX61 AIM21YIR003W 2040 nt3.94□□□□□ -1.78
TY2A-FP0CX61 MON1YGL124C 1935 nt3.94□□□□□ -1.78
TY2A-FP0CX61 TAN1YGL232W 870 nt3.94□□□□□ -1.78
TY2A-FP0CX61 LSB1YGR136W 726 nt3.94□□□□□ -1.78
TY2A-FP0CX61 CDC12YHR107C 1224 nt3.94□□□□□ -1.78
TY2A-FP0CX61 MRPL49YJL096W 486 nt3.94□□□□□ -1.78
TY2A-FP0CX61 YBL010CYBL010C 843 nt3.94□□□□□ -1.78
TY2A-FP0CX61 RCE1YMR274C 948 nt3.94□□□□□ -1.78
TY2A-FP0CX61 YOR366WYOR366W 354 nt3.94□□□□□ -1.78
TY2A-FP0CX61 ATP20YPR020W 348 nt3.94□□□□□ -1.78
TY2A-FP0CX61 CTP1YBR291C 900 nt3.94□□□□□ -1.78
TY2A-FP0CX61 GEM1YAL048C 1989 nt3.94□□□□□ -1.78
TY2A-FP0CX61 HTB1YDR224C 396 nt3.93□□□□□ -1.78
TY2A-FP0CX61 COG7YGL005C 840 nt3.93□□□□□ -1.78
TY2A-FP0CX61 COX4YGL187C 468 nt3.93□□□□□ -1.78
TY2A-FP0CX61 YIL024CYIL024C 570 nt3.93□□□□□ -1.78
TY2A-FP0CX61 YKL131WYKL131W 522 nt3.93□□□□□ -1.78
TY2A-FP0CX61 YLR290CYLR290C 834 nt3.93□□□□□ -1.78
TY2A-FP0CX61 TEM1YML064C 738 nt3.93□□□□□ -1.78
TY2A-FP0CX61 OSW1YOR255W 837 nt3.93□□□□□ -1.78
TY2A-FP0CX61 PPT2YPL148C 522 nt3.93□□□□□ -1.78
TY2A-FP0CX61 CUP9YPL177C 921 nt3.93□□□□□ -1.78
TY2A-FP0CX61 YNR065CYNR065C 3351 nt3.93□□□□□ -1.78
TY2A-FP0CX61 HCM1YCR065W 1695 nt3.93□□□□□ -1.78
TY2A-FP0CX61 CDC15YAR019C 2925 nt3.93□□□□□ -1.78
TY2A-FP0CX61 TIF4632YGL049C 2745 nt3.93□□□□□ -1.78
TY2A-FP0CX61 DAP2YHR028C 2457 nt3.93□□□□□ -1.78
TY2A-FP0CX61 BRE4YDL231C 3378 nt3.93□□□□□ -1.78
TY2A-FP0CX61 BCS1YDR375C 1371 nt3.92□□□□□ -1.78
TY2A-FP0CX61 GYP6YJL044C 1377 nt3.92□□□□□ -1.78
TY2A-FP0CX61 KIC1YHR102W 3243 nt3.92□□□□□ -1.78
TY2A-FP0CX61 YER076CYER076C 909 nt3.92□□□□□ -1.78
TY2A-FP0CX61 MPC3YGR243W 441 nt3.92□□□□□ -1.78
TY2A-FP0CX61 RPS4BYHR203C 786 nt3.92□□□□□ -1.78
TY2A-FP0CX61 CFD1YIL003W 882 nt3.92□□□□□ -1.78
TY2A-FP0CX61 EST3YIL009C-A 546 nt3.92□□□□□ -1.78
TY2A-FP0CX61 AIM22YJL046W 1230 nt3.92□□□□□ -1.78
TY2A-FP0CX61 RPS4AYJR145C 786 nt3.92□□□□□ -1.78
TY2A-FP0CX61 CCE1YKL011C 1062 nt3.92□□□□□ -1.78
TY2A-FP0CX61 GPI12YMR281W 915 nt3.92□□□□□ -1.78
TY2A-FP0CX61 DDP1YOR163W 567 nt3.92□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 19.9 ms