Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.25■□□□□ 0.51
CD3DP04234 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD3DP04234 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD3DP04234 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD3DP04234 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CD3DP04234 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CD3DP04234 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
CD3DP04234 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CD3DP04234 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CD3DP04234 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD3DP04234 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CD3DP04234 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD3DP04234 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CD3DP04234 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.23■□□□□ 0.51
CD3DP04234 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CD3DP04234 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.23■□□□□ 0.51
CD3DP04234 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CD3DP04234 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD3DP04234 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CD3DP04234 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD3DP04234 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD3DP04234 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CD3DP04234 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD3DP04234 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.23■□□□□ 0.51
CD3DP04234 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.23■□□□□ 0.51
CD3DP04234 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CD3DP04234 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD3DP04234 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD3DP04234 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD3DP04234 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.23■□□□□ 0.51
CD3DP04234 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD3DP04234 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.23■□□□□ 0.51
CD3DP04234 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CD3DP04234 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.23■□□□□ 0.51
CD3DP04234 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.23■□□□□ 0.51
CD3DP04234 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.23■□□□□ 0.51
CD3DP04234 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
CD3DP04234 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.22■□□□□ 0.51
CD3DP04234 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD3DP04234 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CD3DP04234 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD3DP04234 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD3DP04234 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD3DP04234 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CD3DP04234 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD3DP04234 KRT18P60-201ENST00000312876 1297 ntBASIC18.22■□□□□ 0.51
CD3DP04234 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD3DP04234 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.22■□□□□ 0.51
CD3DP04234 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CD3DP04234 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.22■□□□□ 0.51
CD3DP04234 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.22■□□□□ 0.51
CD3DP04234 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CD3DP04234 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD3DP04234 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CD3DP04234 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD3DP04234 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.22■□□□□ 0.51
CD3DP04234 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CD3DP04234 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.21■□□□□ 0.51
CD3DP04234 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.21■□□□□ 0.51
CD3DP04234 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD3DP04234 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD3DP04234 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD3DP04234 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.21■□□□□ 0.51
CD3DP04234 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD3DP04234 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD3DP04234 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CD3DP04234 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD3DP04234 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD3DP04234 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.21■□□□□ 0.51
CD3DP04234 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.21■□□□□ 0.51
CD3DP04234 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.21■□□□□ 0.51
CD3DP04234 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD3DP04234 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD3DP04234 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD3DP04234 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD3DP04234 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD3DP04234 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD3DP04234 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD3DP04234 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.2■□□□□ 0.5
CD3DP04234 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD3DP04234 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.2■□□□□ 0.5
CD3DP04234 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.2■□□□□ 0.5
CD3DP04234 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CD3DP04234 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.2■□□□□ 0.5
CD3DP04234 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.2■□□□□ 0.5
CD3DP04234 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CD3DP04234 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CD3DP04234 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD3DP04234 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD3DP04234 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.19■□□□□ 0.5
CD3DP04234 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CD3DP04234 DUX4L18-201ENST00000553347 1267 ntBASIC18.19■□□□□ 0.5
CD3DP04234 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CD3DP04234 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.19■□□□□ 0.5
CD3DP04234 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD3DP04234 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD3DP04234 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD3DP04234 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD3DP04234 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD3DP04234 AC026471.6-201ENST00000622954 1905 ntBASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms