Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 YBR139WYBR139W 1527 nt3.83□□□□□ -1.8
TY1B-HO13535 MAL12YGR292W 1755 nt3.83□□□□□ -1.8
TY1B-HO13535 URA2YJL130C 6645 nt3.83□□□□□ -1.8
TY1B-HO13535 YDL109CYDL109C 1944 nt3.83□□□□□ -1.8
TY1B-HO13535 RTA1YGR213C 954 nt3.82□□□□□ -1.8
TY1B-HO13535 BRR2YER172C 6492 nt3.82□□□□□ -1.8
TY1B-HO13535 RRP1YDR087C 837 nt3.81□□□□□ -1.8
TY1B-HO13535 FPR1YNL135C 345 nt3.81□□□□□ -1.8
TY1B-HO13535 KAP123YER110C 3342 nt3.81□□□□□ -1.8
TY1B-HO13535 RPA190YOR341W 4995 nt3.81□□□□□ -1.8
TY1B-HO13535 YDR401WYDR401W 564 nt3.81□□□□□ -1.8
TY1B-HO13535 YHR177WYHR177W 1362 nt3.8□□□□□ -1.8
TY1B-HO13535 RPL24BYGR148C 468 nt3.8□□□□□ -1.8
TY1B-HO13535 SAP190YKR028W 3102 nt3.8□□□□□ -1.8
TY1B-HO13535 FLO10YKR102W 3510 nt3.79□□□□□ -1.8
TY1B-HO13535 RMA1YKL132C 1293 nt3.79□□□□□ -1.8
TY1B-HO13535 EDS1YBR033W 2760 nt3.79□□□□□ -1.8
TY1B-HO13535 CNA1YLR433C 1662 nt3.78□□□□□ -1.8
TY1B-HO13535 PCL8YPL219W 1479 nt3.78□□□□□ -1.8
TY1B-HO13535 RPL14BYHL001W 417 nt3.78□□□□□ -1.8
TY1B-HO13535 NCE102YPR149W 522 nt3.78□□□□□ -1.8
TY1B-HO13535 HFA1YMR207C 6372 nt3.78□□□□□ -1.8
TY1B-HO13535 CEP3YMR168C 1827 nt3.77□□□□□ -1.81
TY1B-HO13535 SUL1YBR294W 2580 nt3.77□□□□□ -1.81
TY1B-HO13535 IOC2YLR095C 2439 nt3.77□□□□□ -1.81
TY1B-HO13535 CCT7YJL111W 1653 nt3.77□□□□□ -1.81
TY1B-HO13535 GPI19YDR437W 423 nt3.76□□□□□ -1.81
TY1B-HO13535 YIL047C-AYIL047C-A 369 nt3.76□□□□□ -1.81
TY1B-HO13535 GAS5YOL030W 1455 nt3.76□□□□□ -1.81
TY1B-HO13535 CCH1YGR217W 6120 nt3.76□□□□□ -1.81
TY1B-HO13535 NGL3YML118W 1518 nt3.76□□□□□ -1.81
TY1B-HO13535 DET1YDR051C 1005 nt3.76□□□□□ -1.81
TY1B-HO13535 SCM4YGR049W 564 nt3.76□□□□□ -1.81
TY1B-HO13535 YIL174WYIL174W 228 nt3.76□□□□□ -1.81
TY1B-HO13535 YJL222W-AYJL222W-A 228 nt3.76□□□□□ -1.81
TY1B-HO13535 ORM2YLR350W 651 nt3.76□□□□□ -1.81
TY1B-HO13535 YBL055CYBL055C 1257 nt3.76□□□□□ -1.81
TY1B-HO13535 ARO1YDR127W 4767 nt3.76□□□□□ -1.81
TY1B-HO13535 SRB5YGR104C 924 nt3.75□□□□□ -1.81
TY1B-HO13535 SMA1YPL027W 738 nt3.75□□□□□ -1.81
TY1B-HO13535 PFF1YBR074W 2931 nt3.75□□□□□ -1.81
TY1B-HO13535 YHB1YGR234W 1200 nt3.74□□□□□ -1.81
TY1B-HO13535 YBR116CYBR116C 528 nt3.74□□□□□ -1.81
TY1B-HO13535 UBP14YBR058C 2346 nt3.74□□□□□ -1.81
TY1B-HO13535 PDR5YOR153W 4536 nt3.74□□□□□ -1.81
TY1B-HO13535 MST27YGL051W 705 nt3.74□□□□□ -1.81
TY1B-HO13535 PAU17YLL025W 375 nt3.74□□□□□ -1.81
TY1B-HO13535 UBC12YLR306W 567 nt3.74□□□□□ -1.81
TY1B-HO13535 RPC19YNL113W 429 nt3.74□□□□□ -1.81
TY1B-HO13535 NOP13YNL175C 1212 nt3.74□□□□□ -1.81
TY1B-HO13535 PRM7YDL039C 2097 nt3.73□□□□□ -1.81
TY1B-HO13535 TGL1YKL140W 1647 nt3.73□□□□□ -1.81
TY1B-HO13535 PSY2YNL201C 2577 nt3.73□□□□□ -1.81
TY1B-HO13535 YLR125WYLR125W 411 nt3.73□□□□□ -1.81
TY1B-HO13535 HCM1YCR065W 1695 nt3.72□□□□□ -1.81
TY1B-HO13535 IKS1YJL057C 2004 nt3.72□□□□□ -1.81
TY1B-HO13535 SEC31YDL195W 3822 nt3.72□□□□□ -1.81
TY1B-HO13535 PWP2YCR057C 2772 nt3.72□□□□□ -1.81
TY1B-HO13535 RSC3YDR303C 2658 nt3.72□□□□□ -1.81
TY1B-HO13535 MEF2YJL102W 2460 nt3.72□□□□□ -1.81
TY1B-HO13535 SEC14YMR079W 915 nt3.71□□□□□ -1.81
TY1B-HO13535 YIL014C-AYIL014C-A 315 nt3.71□□□□□ -1.82
TY1B-HO13535 YJU2YKL095W 837 nt3.71□□□□□ -1.82
TY1B-HO13535 GIP4YAL031C 2283 nt3.7□□□□□ -1.82
TY1B-HO13535 YFR016CYFR016C 3702 nt3.7□□□□□ -1.82
TY1B-HO13535 RPS21BYJL136C 264 nt3.69□□□□□ -1.82
TY1B-HO13535 YOR055WYOR055W 435 nt3.69□□□□□ -1.82
TY1B-HO13535 RRP36YOR287C 903 nt3.69□□□□□ -1.82
TY1B-HO13535 RRG7YOR305W 729 nt3.69□□□□□ -1.82
TY1B-HO13535 PHO88YBR106W 567 nt3.69□□□□□ -1.82
TY1B-HO13535 RAV1YJR033C 4074 nt3.69□□□□□ -1.82
TY1B-HO13535 ICR1ICR1 3199 nt3.69□□□□□ -1.82
TY1B-HO13535 YGR067CYGR067C 2415 nt3.69□□□□□ -1.82
TY1B-HO13535 TOM20YGR082W 552 nt3.68□□□□□ -1.82
TY1B-HO13535 YKL066WYKL066W 444 nt3.68□□□□□ -1.82
TY1B-HO13535 REG2YBR050C 1017 nt3.68□□□□□ -1.82
TY1B-HO13535 VPS45YGL095C 1734 nt3.68□□□□□ -1.82
TY1B-HO13535 KIP3YGL216W 2418 nt3.68□□□□□ -1.82
TY1B-HO13535 POL1YNL102W 4407 nt3.68□□□□□ -1.82
TY1B-HO13535 YDR464C-AYDR464C-A 189 nt3.68□□□□□ -1.82
TY1B-HO13535 CAP2YIL034C 864 nt3.68□□□□□ -1.82
TY1B-HO13535 RPL20BYOR312C 519 nt3.68□□□□□ -1.82
TY1B-HO13535 GDI1YER136W 1356 nt3.68□□□□□ -1.82
TY1B-HO13535 VPS33YLR396C 2076 nt3.67□□□□□ -1.82
TY1B-HO13535 GPI8YDR331W 1236 nt3.67□□□□□ -1.82
TY1B-HO13535 ANS1YHR126C 480 nt3.67□□□□□ -1.82
TY1B-HO13535 POG1YIL122W 1056 nt3.67□□□□□ -1.82
TY1B-HO13535 KEL2YGR238C 2649 nt3.67□□□□□ -1.82
TY1B-HO13535 YGR027W-BYGR027W-B 5268 nt3.67□□□□□ -1.82
TY1B-HO13535 YLR227W-BYLR227W-B 5268 nt3.67□□□□□ -1.82
TY1B-HO13535 YPR158C-DYPR158C-D 5268 nt3.67□□□□□ -1.82
TY1B-HO13535 YER133W-AYER133W-A 342 nt3.66□□□□□ -1.82
TY1B-HO13535 YIL028WYIL028W 399 nt3.66□□□□□ -1.82
TY1B-HO13535 SCD5YOR329C 2619 nt3.66□□□□□ -1.82
TY1B-HO13535 YPR015CYPR015C 744 nt3.66□□□□□ -1.82
TY1B-HO13535 YBR085C-AYBR085C-A 258 nt3.66□□□□□ -1.82
TY1B-HO13535 RPN13YLR421C 471 nt3.66□□□□□ -1.82
TY1B-HO13535 LCL1YPL056C 306 nt3.66□□□□□ -1.82
TY1B-HO13535 SKM1YOL113W 1968 nt3.65□□□□□ -1.83
TY1B-HO13535 YOL159C-AYOL159C-A 273 nt3.65□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 81.3 ms