Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
LRRC53A6NM62 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
LRRC53A6NM62 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
LRRC53A6NM62 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LRRC53A6NM62 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
LRRC53A6NM62 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LRRC53A6NM62 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.23■■□□□ 1.31
LRRC53A6NM62 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.23■■□□□ 1.31
LRRC53A6NM62 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
LRRC53A6NM62 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
LRRC53A6NM62 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC23.22■■□□□ 1.31
LRRC53A6NM62 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.22■■□□□ 1.31
LRRC53A6NM62 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
LRRC53A6NM62 AC010525.1-201ENST00000585559 441 ntBASIC23.22■■□□□ 1.31
LRRC53A6NM62 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
LRRC53A6NM62 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.22■■□□□ 1.31
LRRC53A6NM62 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
LRRC53A6NM62 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
LRRC53A6NM62 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
LRRC53A6NM62 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LRRC53A6NM62 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LRRC53A6NM62 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LRRC53A6NM62 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.21■■□□□ 1.31
LRRC53A6NM62 AC068587.7-201ENST00000641602 218 ntBASIC23.21■■□□□ 1.31
LRRC53A6NM62 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.21■■□□□ 1.31
LRRC53A6NM62 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.21■■□□□ 1.31
LRRC53A6NM62 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LRRC53A6NM62 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
LRRC53A6NM62 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.21■■□□□ 1.31
LRRC53A6NM62 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
LRRC53A6NM62 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.2■■□□□ 1.3
LRRC53A6NM62 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
LRRC53A6NM62 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
LRRC53A6NM62 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
LRRC53A6NM62 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LRRC53A6NM62 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.2■■□□□ 1.3
LRRC53A6NM62 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
LRRC53A6NM62 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
LRRC53A6NM62 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.19■■□□□ 1.3
LRRC53A6NM62 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LRRC53A6NM62 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.19■■□□□ 1.3
LRRC53A6NM62 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.19■■□□□ 1.3
LRRC53A6NM62 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
LRRC53A6NM62 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
LRRC53A6NM62 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LRRC53A6NM62 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23.19■■□□□ 1.3
LRRC53A6NM62 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
LRRC53A6NM62 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
LRRC53A6NM62 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
LRRC53A6NM62 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LRRC53A6NM62 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
LRRC53A6NM62 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.19■■□□□ 1.3
LRRC53A6NM62 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
LRRC53A6NM62 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.18■■□□□ 1.3
LRRC53A6NM62 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LRRC53A6NM62 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.18■■□□□ 1.3
LRRC53A6NM62 AC092171.4-201ENST00000609130 632 ntBASIC23.18■■□□□ 1.3
LRRC53A6NM62 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.18■■□□□ 1.3
LRRC53A6NM62 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LRRC53A6NM62 AF106564.1-201ENST00000607058 2553 ntBASIC23.18■■□□□ 1.3
LRRC53A6NM62 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LRRC53A6NM62 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LRRC53A6NM62 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.18■■□□□ 1.3
LRRC53A6NM62 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LRRC53A6NM62 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC23.17■■□□□ 1.3
LRRC53A6NM62 AL024507.2-201ENST00000606070 2574 ntBASIC23.17■■□□□ 1.3
LRRC53A6NM62 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LRRC53A6NM62 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.17■■□□□ 1.3
LRRC53A6NM62 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.17■■□□□ 1.3
LRRC53A6NM62 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LRRC53A6NM62 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.17■■□□□ 1.3
LRRC53A6NM62 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC23.17■■□□□ 1.3
LRRC53A6NM62 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LRRC53A6NM62 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LRRC53A6NM62 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.17■■□□□ 1.3
LRRC53A6NM62 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
LRRC53A6NM62 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LRRC53A6NM62 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LRRC53A6NM62 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
LRRC53A6NM62 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.16■■□□□ 1.3
LRRC53A6NM62 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LRRC53A6NM62 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
LRRC53A6NM62 AL356441.2-201ENST00000443009 864 ntBASIC23.16■■□□□ 1.3
LRRC53A6NM62 AC010141.3-201ENST00000456659 717 ntBASIC23.16■■□□□ 1.3
LRRC53A6NM62 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
LRRC53A6NM62 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LRRC53A6NM62 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC23.16■■□□□ 1.3
LRRC53A6NM62 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LRRC53A6NM62 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC23.16■■□□□ 1.3
LRRC53A6NM62 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LRRC53A6NM62 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LRRC53A6NM62 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LRRC53A6NM62 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LRRC53A6NM62 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
LRRC53A6NM62 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LRRC53A6NM62 FEM1AP4-201ENST00000443167 1987 ntBASIC23.15■■□□□ 1.3
LRRC53A6NM62 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
LRRC53A6NM62 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LRRC53A6NM62 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LRRC53A6NM62 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms