Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.1■□□□□ 0.49
TRBV23-1A0A0A0MS06 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV23-1A0A0A0MS06 AC099791.1-201ENST00000416440 715 ntBASIC18.1■□□□□ 0.49
TRBV23-1A0A0A0MS06 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.1■□□□□ 0.49
TRBV23-1A0A0A0MS06 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.1■□□□□ 0.49
TRBV23-1A0A0A0MS06 AL136967.2-201ENST00000623968 743 ntBASIC18.1■□□□□ 0.49
TRBV23-1A0A0A0MS06 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV23-1A0A0A0MS06 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
TRBV23-1A0A0A0MS06 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV23-1A0A0A0MS06 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.1■□□□□ 0.49
TRBV23-1A0A0A0MS06 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV23-1A0A0A0MS06 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV23-1A0A0A0MS06 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV23-1A0A0A0MS06 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV23-1A0A0A0MS06 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TRBV23-1A0A0A0MS06 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV23-1A0A0A0MS06 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV23-1A0A0A0MS06 ESRRAP2-201ENST00000418437 1549 ntBASIC18.09■□□□□ 0.49
TRBV23-1A0A0A0MS06 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TRBV23-1A0A0A0MS06 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.09■□□□□ 0.49
TRBV23-1A0A0A0MS06 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV23-1A0A0A0MS06 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.09■□□□□ 0.49
TRBV23-1A0A0A0MS06 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TRBV23-1A0A0A0MS06 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV23-1A0A0A0MS06 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV23-1A0A0A0MS06 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV23-1A0A0A0MS06 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TRBV23-1A0A0A0MS06 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.09■□□□□ 0.49
TRBV23-1A0A0A0MS06 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TRBV23-1A0A0A0MS06 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV23-1A0A0A0MS06 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.08■□□□□ 0.49
TRBV23-1A0A0A0MS06 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
TRBV23-1A0A0A0MS06 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.49
TRBV23-1A0A0A0MS06 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRBV23-1A0A0A0MS06 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRBV23-1A0A0A0MS06 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.08■□□□□ 0.49
TRBV23-1A0A0A0MS06 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
TRBV23-1A0A0A0MS06 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV23-1A0A0A0MS06 CA15P2-201ENST00000611168 834 ntBASIC18.08■□□□□ 0.48
TRBV23-1A0A0A0MS06 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV23-1A0A0A0MS06 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.08■□□□□ 0.48
TRBV23-1A0A0A0MS06 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV23-1A0A0A0MS06 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.08■□□□□ 0.48
TRBV23-1A0A0A0MS06 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV23-1A0A0A0MS06 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV23-1A0A0A0MS06 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.07■□□□□ 0.48
TRBV23-1A0A0A0MS06 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TRBV23-1A0A0A0MS06 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TRBV23-1A0A0A0MS06 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV23-1A0A0A0MS06 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.07■□□□□ 0.48
TRBV23-1A0A0A0MS06 AC010141.3-201ENST00000456659 717 ntBASIC18.07■□□□□ 0.48
TRBV23-1A0A0A0MS06 IGHV3-19-201ENST00000521488 291 ntBASIC18.07■□□□□ 0.48
TRBV23-1A0A0A0MS06 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.07■□□□□ 0.48
TRBV23-1A0A0A0MS06 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV23-1A0A0A0MS06 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
TRBV23-1A0A0A0MS06 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV23-1A0A0A0MS06 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.07■□□□□ 0.48
TRBV23-1A0A0A0MS06 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV23-1A0A0A0MS06 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TRBV23-1A0A0A0MS06 AC073130.3-201ENST00000624389 2278 ntBASIC18.07■□□□□ 0.48
TRBV23-1A0A0A0MS06 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV23-1A0A0A0MS06 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV23-1A0A0A0MS06 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV23-1A0A0A0MS06 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV23-1A0A0A0MS06 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV23-1A0A0A0MS06 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV23-1A0A0A0MS06 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV23-1A0A0A0MS06 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV23-1A0A0A0MS06 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV23-1A0A0A0MS06 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV23-1A0A0A0MS06 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
TRBV23-1A0A0A0MS06 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV23-1A0A0A0MS06 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV23-1A0A0A0MS06 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV23-1A0A0A0MS06 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV23-1A0A0A0MS06 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV23-1A0A0A0MS06 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.06■□□□□ 0.48
TRBV23-1A0A0A0MS06 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.06■□□□□ 0.48
TRBV23-1A0A0A0MS06 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
TRBV23-1A0A0A0MS06 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV23-1A0A0A0MS06 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TRBV23-1A0A0A0MS06 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TRBV23-1A0A0A0MS06 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV23-1A0A0A0MS06 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV23-1A0A0A0MS06 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV23-1A0A0A0MS06 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV23-1A0A0A0MS06 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV23-1A0A0A0MS06 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.05■□□□□ 0.48
TRBV23-1A0A0A0MS06 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV23-1A0A0A0MS06 AL137060.1-201ENST00000618151 2648 ntBASIC18.05■□□□□ 0.48
TRBV23-1A0A0A0MS06 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV23-1A0A0A0MS06 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV23-1A0A0A0MS06 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.05■□□□□ 0.48
TRBV23-1A0A0A0MS06 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TRBV23-1A0A0A0MS06 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV23-1A0A0A0MS06 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV23-1A0A0A0MS06 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TRBV23-1A0A0A0MS06 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV23-1A0A0A0MS06 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV23-1A0A0A0MS06 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms