Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CSNK1G3Q9Y6M4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CSNK1G3Q9Y6M4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSNK1G3Q9Y6M4 ANOS2P-203ENST00000472227 1816 ntBASIC21.18■□□□□ 0.98
CSNK1G3Q9Y6M4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSNK1G3Q9Y6M4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.18■□□□□ 0.98
CSNK1G3Q9Y6M4 HLA-L-209ENST00000420110 1011 ntBASIC21.18■□□□□ 0.98
CSNK1G3Q9Y6M4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.18■□□□□ 0.98
CSNK1G3Q9Y6M4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CSNK1G3Q9Y6M4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.18■□□□□ 0.98
CSNK1G3Q9Y6M4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.18■□□□□ 0.98
CSNK1G3Q9Y6M4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.18■□□□□ 0.98
CSNK1G3Q9Y6M4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSNK1G3Q9Y6M4 ESRRAP2-201ENST00000418437 1549 ntBASIC21.18■□□□□ 0.98
CSNK1G3Q9Y6M4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
CSNK1G3Q9Y6M4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSNK1G3Q9Y6M4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.17■□□□□ 0.98
CSNK1G3Q9Y6M4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.17■□□□□ 0.98
CSNK1G3Q9Y6M4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
CSNK1G3Q9Y6M4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSNK1G3Q9Y6M4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSNK1G3Q9Y6M4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSNK1G3Q9Y6M4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSNK1G3Q9Y6M4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CSNK1G3Q9Y6M4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSNK1G3Q9Y6M4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CSNK1G3Q9Y6M4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CSNK1G3Q9Y6M4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.16■□□□□ 0.98
CSNK1G3Q9Y6M4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CSNK1G3Q9Y6M4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CSNK1G3Q9Y6M4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.16■□□□□ 0.98
CSNK1G3Q9Y6M4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CSNK1G3Q9Y6M4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.16■□□□□ 0.98
CSNK1G3Q9Y6M4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CSNK1G3Q9Y6M4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CSNK1G3Q9Y6M4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CSNK1G3Q9Y6M4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CSNK1G3Q9Y6M4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CSNK1G3Q9Y6M4 KRT87P-202ENST00000534226 1464 ntBASIC21.15■□□□□ 0.98
CSNK1G3Q9Y6M4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSNK1G3Q9Y6M4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CSNK1G3Q9Y6M4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.15■□□□□ 0.98
CSNK1G3Q9Y6M4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.15■□□□□ 0.98
CSNK1G3Q9Y6M4 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.15■□□□□ 0.98
CSNK1G3Q9Y6M4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.15■□□□□ 0.98
CSNK1G3Q9Y6M4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSNK1G3Q9Y6M4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
CSNK1G3Q9Y6M4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.14■□□□□ 0.98
CSNK1G3Q9Y6M4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CSNK1G3Q9Y6M4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CSNK1G3Q9Y6M4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CSNK1G3Q9Y6M4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.14■□□□□ 0.97
CSNK1G3Q9Y6M4 AC011767.1-201ENST00000617410 1153 ntBASIC21.14■□□□□ 0.97
CSNK1G3Q9Y6M4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CSNK1G3Q9Y6M4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CSNK1G3Q9Y6M4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CSNK1G3Q9Y6M4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CSNK1G3Q9Y6M4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CSNK1G3Q9Y6M4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CSNK1G3Q9Y6M4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.13■□□□□ 0.97
CSNK1G3Q9Y6M4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CSNK1G3Q9Y6M4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CSNK1G3Q9Y6M4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CSNK1G3Q9Y6M4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CSNK1G3Q9Y6M4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CSNK1G3Q9Y6M4 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CSNK1G3Q9Y6M4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CSNK1G3Q9Y6M4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CSNK1G3Q9Y6M4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CSNK1G3Q9Y6M4 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.13■□□□□ 0.97
CSNK1G3Q9Y6M4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.13■□□□□ 0.97
CSNK1G3Q9Y6M4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.13■□□□□ 0.97
CSNK1G3Q9Y6M4 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.13■□□□□ 0.97
CSNK1G3Q9Y6M4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.13■□□□□ 0.97
CSNK1G3Q9Y6M4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CSNK1G3Q9Y6M4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CSNK1G3Q9Y6M4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.12■□□□□ 0.97
CSNK1G3Q9Y6M4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CSNK1G3Q9Y6M4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CSNK1G3Q9Y6M4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CSNK1G3Q9Y6M4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CSNK1G3Q9Y6M4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CSNK1G3Q9Y6M4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CSNK1G3Q9Y6M4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CSNK1G3Q9Y6M4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
CSNK1G3Q9Y6M4 AC079089.2-201ENST00000531211 1277 ntBASIC21.12■□□□□ 0.97
CSNK1G3Q9Y6M4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.12■□□□□ 0.97
CSNK1G3Q9Y6M4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.12■□□□□ 0.97
CSNK1G3Q9Y6M4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CSNK1G3Q9Y6M4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.12■□□□□ 0.97
CSNK1G3Q9Y6M4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CSNK1G3Q9Y6M4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.12■□□□□ 0.97
CSNK1G3Q9Y6M4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CSNK1G3Q9Y6M4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.11■□□□□ 0.97
CSNK1G3Q9Y6M4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSNK1G3Q9Y6M4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSNK1G3Q9Y6M4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSNK1G3Q9Y6M4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSNK1G3Q9Y6M4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.11■□□□□ 0.97
CSNK1G3Q9Y6M4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms