Protein–RNA interactions for Protein: Q9HC29

NOD2, Nucleotide-binding oligomerization domain-containing protein 2, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD2Q9HC29 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
NOD2Q9HC29 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NOD2Q9HC29 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NOD2Q9HC29 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
NOD2Q9HC29 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NOD2Q9HC29 EDA-201ENST00000338901 1233 ntBASIC22.3■■□□□ 1.16
NOD2Q9HC29 SLC47A1P1-202ENST00000449666 945 ntBASIC22.3■■□□□ 1.16
NOD2Q9HC29 OR2I1P-207ENST00000453522 948 ntBASIC22.3■■□□□ 1.16
NOD2Q9HC29 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.3■■□□□ 1.16
NOD2Q9HC29 AL031432.3-201ENST00000607698 485 ntBASIC22.3■■□□□ 1.16
NOD2Q9HC29 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC22.3■■□□□ 1.16
NOD2Q9HC29 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NOD2Q9HC29 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NOD2Q9HC29 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.3■■□□□ 1.16
NOD2Q9HC29 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
NOD2Q9HC29 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
NOD2Q9HC29 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
NOD2Q9HC29 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NOD2Q9HC29 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
NOD2Q9HC29 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NOD2Q9HC29 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.29■■□□□ 1.16
NOD2Q9HC29 MIR638-201ENST00000385237 100 ntBASIC22.29■■□□□ 1.16
NOD2Q9HC29 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
NOD2Q9HC29 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NOD2Q9HC29 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.29■■□□□ 1.16
NOD2Q9HC29 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NOD2Q9HC29 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NOD2Q9HC29 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NOD2Q9HC29 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NOD2Q9HC29 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.29■■□□□ 1.16
NOD2Q9HC29 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
NOD2Q9HC29 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
NOD2Q9HC29 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
NOD2Q9HC29 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
NOD2Q9HC29 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
NOD2Q9HC29 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
NOD2Q9HC29 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NOD2Q9HC29 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
NOD2Q9HC29 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.28■■□□□ 1.16
NOD2Q9HC29 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NOD2Q9HC29 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
NOD2Q9HC29 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
NOD2Q9HC29 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.28■■□□□ 1.16
NOD2Q9HC29 AL355001.2-201ENST00000620617 1191 ntBASIC22.28■■□□□ 1.16
NOD2Q9HC29 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.28■■□□□ 1.16
NOD2Q9HC29 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
NOD2Q9HC29 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
NOD2Q9HC29 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NOD2Q9HC29 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
NOD2Q9HC29 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NOD2Q9HC29 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
NOD2Q9HC29 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
NOD2Q9HC29 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.27■■□□□ 1.16
NOD2Q9HC29 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
NOD2Q9HC29 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
NOD2Q9HC29 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
NOD2Q9HC29 PKD1P6-201ENST00000343738 4769 ntBASIC22.27■■□□□ 1.16
NOD2Q9HC29 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
NOD2Q9HC29 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.27■■□□□ 1.15
NOD2Q9HC29 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
NOD2Q9HC29 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.26■■□□□ 1.15
NOD2Q9HC29 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NOD2Q9HC29 AC005837.3-201ENST00000612163 286 ntBASIC22.26■■□□□ 1.15
NOD2Q9HC29 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NOD2Q9HC29 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NOD2Q9HC29 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
NOD2Q9HC29 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
NOD2Q9HC29 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NOD2Q9HC29 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
NOD2Q9HC29 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NOD2Q9HC29 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NOD2Q9HC29 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.25■■□□□ 1.15
NOD2Q9HC29 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NOD2Q9HC29 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NOD2Q9HC29 BX842568.3-201ENST00000418104 571 ntBASIC22.25■■□□□ 1.15
NOD2Q9HC29 AP001330.3-201ENST00000520123 633 ntBASIC22.25■■□□□ 1.15
NOD2Q9HC29 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
NOD2Q9HC29 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.25■■□□□ 1.15
NOD2Q9HC29 AC008764.7-201ENST00000593779 1081 ntBASIC22.25■■□□□ 1.15
NOD2Q9HC29 AC233992.3-201ENST00000607491 485 ntBASIC22.25■■□□□ 1.15
NOD2Q9HC29 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
NOD2Q9HC29 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NOD2Q9HC29 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NOD2Q9HC29 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
NOD2Q9HC29 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.24■■□□□ 1.15
NOD2Q9HC29 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NOD2Q9HC29 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
NOD2Q9HC29 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NOD2Q9HC29 SUDS3P1-201ENST00000505831 966 ntBASIC22.24■■□□□ 1.15
NOD2Q9HC29 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.24■■□□□ 1.15
NOD2Q9HC29 RNF165-205ENST00000588679 2904 ntBASIC22.24■■□□□ 1.15
NOD2Q9HC29 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NOD2Q9HC29 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
NOD2Q9HC29 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.24■■□□□ 1.15
NOD2Q9HC29 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
NOD2Q9HC29 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
NOD2Q9HC29 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
NOD2Q9HC29 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
NOD2Q9HC29 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NOD2Q9HC29 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms