Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP28Q9H239 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP28Q9H239 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MMP28Q9H239 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.94■□□□□ 0.62
MMP28Q9H239 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.94■□□□□ 0.62
MMP28Q9H239 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP28Q9H239 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MMP28Q9H239 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP28Q9H239 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MMP28Q9H239 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
MMP28Q9H239 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.93■□□□□ 0.62
MMP28Q9H239 AC103724.3-201ENST00000564481 992 ntBASIC18.93■□□□□ 0.62
MMP28Q9H239 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.93■□□□□ 0.62
MMP28Q9H239 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MMP28Q9H239 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.93■□□□□ 0.62
MMP28Q9H239 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
MMP28Q9H239 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MMP28Q9H239 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MMP28Q9H239 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.93■□□□□ 0.62
MMP28Q9H239 LINC01006-201ENST00000333319 2292 ntBASIC18.93■□□□□ 0.62
MMP28Q9H239 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.93■□□□□ 0.62
MMP28Q9H239 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
MMP28Q9H239 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
MMP28Q9H239 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.92■□□□□ 0.62
MMP28Q9H239 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MMP28Q9H239 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP28Q9H239 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP28Q9H239 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
MMP28Q9H239 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MMP28Q9H239 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP28Q9H239 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP28Q9H239 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP28Q9H239 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.92■□□□□ 0.62
MMP28Q9H239 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.92■□□□□ 0.62
MMP28Q9H239 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
MMP28Q9H239 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP28Q9H239 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.92■□□□□ 0.62
MMP28Q9H239 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP28Q9H239 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP28Q9H239 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
MMP28Q9H239 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP28Q9H239 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP28Q9H239 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.92■□□□□ 0.62
MMP28Q9H239 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
MMP28Q9H239 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.92■□□□□ 0.62
MMP28Q9H239 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
MMP28Q9H239 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.92■□□□□ 0.62
MMP28Q9H239 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP28Q9H239 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP28Q9H239 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP28Q9H239 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.91■□□□□ 0.62
MMP28Q9H239 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MMP28Q9H239 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP28Q9H239 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP28Q9H239 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP28Q9H239 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
MMP28Q9H239 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MMP28Q9H239 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP28Q9H239 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP28Q9H239 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP28Q9H239 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP28Q9H239 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
MMP28Q9H239 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MMP28Q9H239 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MMP28Q9H239 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.91■□□□□ 0.62
MMP28Q9H239 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MMP28Q9H239 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.91■□□□□ 0.62
MMP28Q9H239 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.91■□□□□ 0.62
MMP28Q9H239 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
MMP28Q9H239 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
MMP28Q9H239 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP28Q9H239 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP28Q9H239 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
MMP28Q9H239 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.9■□□□□ 0.62
MMP28Q9H239 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.9■□□□□ 0.62
MMP28Q9H239 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP28Q9H239 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP28Q9H239 AC009299.2-201ENST00000482477 511 ntBASIC18.9■□□□□ 0.62
MMP28Q9H239 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP28Q9H239 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP28Q9H239 AL031848.2-201ENST00000607670 837 ntBASIC18.9■□□□□ 0.62
MMP28Q9H239 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP28Q9H239 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.9■□□□□ 0.62
MMP28Q9H239 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP28Q9H239 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP28Q9H239 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.9■□□□□ 0.62
MMP28Q9H239 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP28Q9H239 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.9■□□□□ 0.62
MMP28Q9H239 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP28Q9H239 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.9■□□□□ 0.62
MMP28Q9H239 AC244015.2-201ENST00000616358 1861 ntBASIC18.9■□□□□ 0.62
MMP28Q9H239 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MMP28Q9H239 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP28Q9H239 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MMP28Q9H239 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP28Q9H239 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MMP28Q9H239 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP28Q9H239 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.62
MMP28Q9H239 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MMP28Q9H239 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms