Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC30.76■■■□□ 2.52
LTBP4Q8N2S1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
LTBP4Q8N2S1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC30.75■■■□□ 2.51
LTBP4Q8N2S1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
LTBP4Q8N2S1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC30.75■■■□□ 2.51
LTBP4Q8N2S1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC30.75■■■□□ 2.51
LTBP4Q8N2S1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC30.75■■■□□ 2.51
LTBP4Q8N2S1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
LTBP4Q8N2S1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC30.75■■■□□ 2.51
LTBP4Q8N2S1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC30.74■■■□□ 2.51
LTBP4Q8N2S1 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
LTBP4Q8N2S1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
LTBP4Q8N2S1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC30.74■■■□□ 2.51
LTBP4Q8N2S1 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
LTBP4Q8N2S1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
LTBP4Q8N2S1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.74■■■□□ 2.51
LTBP4Q8N2S1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC30.74■■■□□ 2.51
LTBP4Q8N2S1 AC009237.3-201ENST00000393279 1427 ntBASIC30.73■■■□□ 2.51
LTBP4Q8N2S1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
LTBP4Q8N2S1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC30.73■■■□□ 2.51
LTBP4Q8N2S1 C2orf69P4-201ENST00000565394 541 ntBASIC30.73■■■□□ 2.51
LTBP4Q8N2S1 CYP2T3P-201ENST00000601990 817 ntBASIC30.73■■■□□ 2.51
LTBP4Q8N2S1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
LTBP4Q8N2S1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
LTBP4Q8N2S1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC30.73■■■□□ 2.51
LTBP4Q8N2S1 AC097493.4-201ENST00000641197 219 ntBASIC30.73■■■□□ 2.51
LTBP4Q8N2S1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
LTBP4Q8N2S1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC30.72■■■□□ 2.51
LTBP4Q8N2S1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC30.72■■■□□ 2.51
LTBP4Q8N2S1 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC30.72■■■□□ 2.51
LTBP4Q8N2S1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC30.72■■■□□ 2.51
LTBP4Q8N2S1 C1QBPP2-201ENST00000528754 825 ntBASIC30.72■■■□□ 2.51
LTBP4Q8N2S1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC30.72■■■□□ 2.51
LTBP4Q8N2S1 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
LTBP4Q8N2S1 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
LTBP4Q8N2S1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC30.71■■■□□ 2.51
LTBP4Q8N2S1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC30.71■■■□□ 2.51
LTBP4Q8N2S1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
LTBP4Q8N2S1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
LTBP4Q8N2S1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
LTBP4Q8N2S1 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC30.7■■■□□ 2.51
LTBP4Q8N2S1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
LTBP4Q8N2S1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC30.7■■■□□ 2.51
LTBP4Q8N2S1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
LTBP4Q8N2S1 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
LTBP4Q8N2S1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
LTBP4Q8N2S1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC30.7■■■□□ 2.51
LTBP4Q8N2S1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
LTBP4Q8N2S1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC30.7■■■□□ 2.5
LTBP4Q8N2S1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
LTBP4Q8N2S1 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
LTBP4Q8N2S1 AC087499.1-201ENST00000418141 1075 ntBASIC30.69■■■□□ 2.5
LTBP4Q8N2S1 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC30.69■■■□□ 2.5
LTBP4Q8N2S1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC30.69■■■□□ 2.5
LTBP4Q8N2S1 AC008694.1-202ENST00000636953 945 ntBASIC30.69■■■□□ 2.5
LTBP4Q8N2S1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
LTBP4Q8N2S1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
LTBP4Q8N2S1 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
LTBP4Q8N2S1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
LTBP4Q8N2S1 OXCT2P1-201ENST00000447263 1535 ntBASIC30.69■■■□□ 2.5
LTBP4Q8N2S1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
LTBP4Q8N2S1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
LTBP4Q8N2S1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
LTBP4Q8N2S1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC30.69■■■□□ 2.5
LTBP4Q8N2S1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC30.69■■■□□ 2.5
LTBP4Q8N2S1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
LTBP4Q8N2S1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
LTBP4Q8N2S1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
LTBP4Q8N2S1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
LTBP4Q8N2S1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC30.68■■■□□ 2.5
LTBP4Q8N2S1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
LTBP4Q8N2S1 AC133561.5-201ENST00000635547 218 ntBASIC30.68■■■□□ 2.5
LTBP4Q8N2S1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
LTBP4Q8N2S1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC30.67■■■□□ 2.5
LTBP4Q8N2S1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC30.67■■■□□ 2.5
LTBP4Q8N2S1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC30.67■■■□□ 2.5
LTBP4Q8N2S1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC30.67■■■□□ 2.5
LTBP4Q8N2S1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
LTBP4Q8N2S1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
LTBP4Q8N2S1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
LTBP4Q8N2S1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
LTBP4Q8N2S1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
LTBP4Q8N2S1 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC30.66■■■□□ 2.5
LTBP4Q8N2S1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC30.66■■■□□ 2.5
LTBP4Q8N2S1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
LTBP4Q8N2S1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
LTBP4Q8N2S1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC30.66■■■□□ 2.5
LTBP4Q8N2S1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
LTBP4Q8N2S1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
LTBP4Q8N2S1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC30.65■■■□□ 2.5
LTBP4Q8N2S1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC30.65■■■□□ 2.5
LTBP4Q8N2S1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC30.65■■■□□ 2.5
LTBP4Q8N2S1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
LTBP4Q8N2S1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
LTBP4Q8N2S1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
LTBP4Q8N2S1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
LTBP4Q8N2S1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
LTBP4Q8N2S1 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
LTBP4Q8N2S1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC30.65■■■□□ 2.5
LTBP4Q8N2S1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms