Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SNAI3Q3KNW1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SNAI3Q3KNW1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.76■□□□□ 0.59
SNAI3Q3KNW1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNAI3Q3KNW1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNAI3Q3KNW1 FAM99A-202ENST00000538190 1989 ntBASIC18.76■□□□□ 0.59
SNAI3Q3KNW1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.76■□□□□ 0.59
SNAI3Q3KNW1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNAI3Q3KNW1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNAI3Q3KNW1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.76■□□□□ 0.59
SNAI3Q3KNW1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.76■□□□□ 0.59
SNAI3Q3KNW1 AC010141.3-201ENST00000456659 717 ntBASIC18.76■□□□□ 0.59
SNAI3Q3KNW1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNAI3Q3KNW1 AC024257.2-201ENST00000549699 147 ntBASIC18.76■□□□□ 0.59
SNAI3Q3KNW1 AL136162.1-201ENST00000607711 1078 ntBASIC18.76■□□□□ 0.59
SNAI3Q3KNW1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNAI3Q3KNW1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.76■□□□□ 0.59
SNAI3Q3KNW1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNAI3Q3KNW1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNAI3Q3KNW1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SNAI3Q3KNW1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNAI3Q3KNW1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNAI3Q3KNW1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.75■□□□□ 0.59
SNAI3Q3KNW1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.75■□□□□ 0.59
SNAI3Q3KNW1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.75■□□□□ 0.59
SNAI3Q3KNW1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNAI3Q3KNW1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.75■□□□□ 0.59
SNAI3Q3KNW1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNAI3Q3KNW1 OR7E47P-201ENST00000546390 1422 ntBASIC18.74■□□□□ 0.59
SNAI3Q3KNW1 AC010542.4-201ENST00000563151 1910 ntBASIC18.74■□□□□ 0.59
SNAI3Q3KNW1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNAI3Q3KNW1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNAI3Q3KNW1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SNAI3Q3KNW1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.74■□□□□ 0.59
SNAI3Q3KNW1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNAI3Q3KNW1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
SNAI3Q3KNW1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SNAI3Q3KNW1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.74■□□□□ 0.59
SNAI3Q3KNW1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNAI3Q3KNW1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.74■□□□□ 0.59
SNAI3Q3KNW1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.74■□□□□ 0.59
SNAI3Q3KNW1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNAI3Q3KNW1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNAI3Q3KNW1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNAI3Q3KNW1 OXCT2P1-201ENST00000447263 1535 ntBASIC18.74■□□□□ 0.59
SNAI3Q3KNW1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNAI3Q3KNW1 AC135279.3-201ENST00000610945 1311 ntBASIC18.74■□□□□ 0.59
SNAI3Q3KNW1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNAI3Q3KNW1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNAI3Q3KNW1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNAI3Q3KNW1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.73■□□□□ 0.59
SNAI3Q3KNW1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNAI3Q3KNW1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.73■□□□□ 0.59
SNAI3Q3KNW1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SNAI3Q3KNW1 AC096631.2-201ENST00000436136 790 ntBASIC18.73■□□□□ 0.59
SNAI3Q3KNW1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.73■□□□□ 0.59
SNAI3Q3KNW1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNAI3Q3KNW1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNAI3Q3KNW1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNAI3Q3KNW1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SNAI3Q3KNW1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.73■□□□□ 0.59
SNAI3Q3KNW1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNAI3Q3KNW1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNAI3Q3KNW1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNAI3Q3KNW1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.72■□□□□ 0.59
SNAI3Q3KNW1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNAI3Q3KNW1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNAI3Q3KNW1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNAI3Q3KNW1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNAI3Q3KNW1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNAI3Q3KNW1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.72■□□□□ 0.59
SNAI3Q3KNW1 AP005435.1-201ENST00000529293 1178 ntBASIC18.72■□□□□ 0.59
SNAI3Q3KNW1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.72■□□□□ 0.59
SNAI3Q3KNW1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.72■□□□□ 0.59
SNAI3Q3KNW1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SNAI3Q3KNW1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNAI3Q3KNW1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SNAI3Q3KNW1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.72■□□□□ 0.59
SNAI3Q3KNW1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNAI3Q3KNW1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNAI3Q3KNW1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SNAI3Q3KNW1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.71■□□□□ 0.59
SNAI3Q3KNW1 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.71■□□□□ 0.59
SNAI3Q3KNW1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SNAI3Q3KNW1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNAI3Q3KNW1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.71■□□□□ 0.59
SNAI3Q3KNW1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SNAI3Q3KNW1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.71■□□□□ 0.59
SNAI3Q3KNW1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.71■□□□□ 0.59
SNAI3Q3KNW1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNAI3Q3KNW1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
SNAI3Q3KNW1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNAI3Q3KNW1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNAI3Q3KNW1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNAI3Q3KNW1 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNAI3Q3KNW1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.7■□□□□ 0.58
SNAI3Q3KNW1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNAI3Q3KNW1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNAI3Q3KNW1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNAI3Q3KNW1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms