Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 RCN2YOR220W 798 nt5.34□□□□□ -1.55
MSH3P25336 NHP6AYPR052C 282 nt5.34□□□□□ -1.55
MSH3P25336 MBP1YDL056W 2502 nt5.34□□□□□ -1.56
MSH3P25336 BUD22YMR014W 1560 nt5.33□□□□□ -1.56
MSH3P25336 SPO23YBR250W 1572 nt5.33□□□□□ -1.56
MSH3P25336 PRP31YGR091W 1485 nt5.33□□□□□ -1.56
MSH3P25336 YFL002W-BYFL002W-B 1317 nt5.33□□□□□ -1.56
MSH3P25336 YGR161W-AYGR161W-A 1317 nt5.33□□□□□ -1.56
MSH3P25336 YBL100W-AYBL100W-A 1317 nt5.33□□□□□ -1.56
MSH3P25336 YCL020WYCL020W 1317 nt5.33□□□□□ -1.56
MSH3P25336 LHP1YDL051W 828 nt5.33□□□□□ -1.56
MSH3P25336 YDR157WYDR157W 402 nt5.33□□□□□ -1.56
MSH3P25336 DIG2YDR480W 972 nt5.33□□□□□ -1.56
MSH3P25336 RSR1YGR152C 819 nt5.33□□□□□ -1.56
MSH3P25336 YGR153WYGR153W 654 nt5.33□□□□□ -1.56
MSH3P25336 RNR2YJL026W 1200 nt5.33□□□□□ -1.56
MSH3P25336 VMA5YKL080W 1179 nt5.33□□□□□ -1.56
MSH3P25336 MIM2YLR099W-A 264 nt5.33□□□□□ -1.56
MSH3P25336 MOH1YBL049W 417 nt5.33□□□□□ -1.56
MSH3P25336 RNA1YMR235C 1224 nt5.33□□□□□ -1.56
MSH3P25336 ARL1YBR164C 552 nt5.33□□□□□ -1.56
MSH3P25336 VID22YLR373C 2706 nt5.33□□□□□ -1.56
MSH3P25336 SAP155YFR040W 3009 nt5.33□□□□□ -1.56
MSH3P25336 RIM21YNL294C 1602 nt5.33□□□□□ -1.56
MSH3P25336 KAR2YJL034W 2049 nt5.33□□□□□ -1.56
MSH3P25336 MFB1YDR219C 1398 nt5.32□□□□□ -1.56
MSH3P25336 EMP46YLR080W 1335 nt5.32□□□□□ -1.56
MSH3P25336 LDB18YLL049W 540 nt5.32□□□□□ -1.56
MSH3P25336 BUD28YLR062C 378 nt5.32□□□□□ -1.56
MSH3P25336 PNP1YLR209C 936 nt5.32□□□□□ -1.56
MSH3P25336 YLR406C-AYLR406C-A 150 nt5.32□□□□□ -1.56
MSH3P25336 NIP7YPL211W 546 nt5.32□□□□□ -1.56
MSH3P25336 AGE1YDR524C 1449 nt5.31□□□□□ -1.56
MSH3P25336 GRC3YLL035W 1899 nt5.31□□□□□ -1.56
MSH3P25336 MIX14YDR031W 366 nt5.31□□□□□ -1.56
MSH3P25336 VMA22YHR060W 546 nt5.31□□□□□ -1.56
MSH3P25336 CUZ1YNL155W 825 nt5.31□□□□□ -1.56
MSH3P25336 COS1YNL336W 1146 nt5.31□□□□□ -1.56
MSH3P25336 TAF14YPL129W 735 nt5.31□□□□□ -1.56
MSH3P25336 RFC5YBR087W 1065 nt5.31□□□□□ -1.56
MSH3P25336 POL30YBR088C 777 nt5.31□□□□□ -1.56
MSH3P25336 MEF1YLR069C 2286 nt5.31□□□□□ -1.56
MSH3P25336 GCD1YOR260W 1737 nt5.31□□□□□ -1.56
MSH3P25336 SSA2YLL024C 1920 nt5.31□□□□□ -1.56
MSH3P25336 CLG1YGL215W 1359 nt5.3□□□□□ -1.56
MSH3P25336 IMD3YLR432W 1572 nt5.3□□□□□ -1.56
MSH3P25336 MET17YLR303W 1335 nt5.3□□□□□ -1.56
MSH3P25336 KRS1YDR037W 1776 nt5.3□□□□□ -1.56
MSH3P25336 RIM1YCR028C-A 408 nt5.3□□□□□ -1.56
MSH3P25336 PPH3YDR075W 927 nt5.3□□□□□ -1.56
MSH3P25336 GTF1YGR102C 552 nt5.3□□□□□ -1.56
MSH3P25336 MRP4YHL004W 1185 nt5.3□□□□□ -1.56
MSH3P25336 PRM10YJL108C 1152 nt5.3□□□□□ -1.56
MSH3P25336 SRP21YKL122C 504 nt5.3□□□□□ -1.56
MSH3P25336 SDH3YKL141W 597 nt5.3□□□□□ -1.56
MSH3P25336 YLR154W-FYLR154W-F 141 nt5.3□□□□□ -1.56
MSH3P25336 YNL046WYNL046W 519 nt5.3□□□□□ -1.56
MSH3P25336 YCL012CYCL012C 405 nt5.3□□□□□ -1.56
MSH3P25336 MIH1YMR036C 1665 nt5.3□□□□□ -1.56
MSH3P25336 PLM2YDR501W 1566 nt5.29□□□□□ -1.56
MSH3P25336 PUF2YPR042C 3228 nt5.29□□□□□ -1.56
MSH3P25336 EMP47YFL048C 1338 nt5.29□□□□□ -1.56
MSH3P25336 RKM3YBR030W 1659 nt5.29□□□□□ -1.56
MSH3P25336 YPL260WYPL260W 1656 nt5.29□□□□□ -1.56
MSH3P25336 TAF10YDR167W 621 nt5.29□□□□□ -1.56
MSH3P25336 YDR535CYDR535C 501 nt5.29□□□□□ -1.56
MSH3P25336 YER067C-AYER067C-A 324 nt5.29□□□□□ -1.56
MSH3P25336 YER145C-AYER145C-A 438 nt5.29□□□□□ -1.56
MSH3P25336 VMA21YGR105W 234 nt5.29□□□□□ -1.56
MSH3P25336 FMP33YJL161W 543 nt5.29□□□□□ -1.56
MSH3P25336 YAR030CYAR030C 342 nt5.29□□□□□ -1.56
MSH3P25336 YLR257WYLR257W 966 nt5.29□□□□□ -1.56
MSH3P25336 YNL122CYNL122C 348 nt5.29□□□□□ -1.56
MSH3P25336 SSO1YPL232W 873 nt5.29□□□□□ -1.56
MSH3P25336 SSB1YDL229W 1842 nt5.29□□□□□ -1.56
MSH3P25336 SSB2YNL209W 1842 nt5.29□□□□□ -1.56
MSH3P25336 ITT1YML068W 1395 nt5.29□□□□□ -1.56
MSH3P25336 CEX1YOR112W 2286 nt5.28□□□□□ -1.56
MSH3P25336 CTT1YGR088W 1689 nt5.28□□□□□ -1.56
MSH3P25336 SOF1YLL011W 1470 nt5.28□□□□□ -1.56
MSH3P25336 RTR1YER139C 681 nt5.28□□□□□ -1.56
MSH3P25336 MIG2YGL209W 1149 nt5.28□□□□□ -1.56
MSH3P25336 THG1YGR024C 714 nt5.28□□□□□ -1.56
MSH3P25336 TIM10YHR005C-A 282 nt5.28□□□□□ -1.56
MSH3P25336 YIL161WYIL161W 708 nt5.28□□□□□ -1.56
MSH3P25336 ACP1YKL192C 378 nt5.28□□□□□ -1.56
MSH3P25336 AHP1YLR109W 531 nt5.28□□□□□ -1.56
MSH3P25336 VBA2YBR293W 1425 nt5.28□□□□□ -1.56
MSH3P25336 DSS1YMR287C 2910 nt5.28□□□□□ -1.56
MSH3P25336 FZO1YBR179C 2568 nt5.28□□□□□ -1.56
MSH3P25336 AEP2YMR282C 1743 nt5.28□□□□□ -1.56
MSH3P25336 TRM44YPL030W 1704 nt5.28□□□□□ -1.56
MSH3P25336 RVB1YDR190C 1392 nt5.28□□□□□ -1.56
MSH3P25336 FRS1YLR060W 1788 nt5.27□□□□□ -1.57
MSH3P25336 TFB3YDR460W 966 nt5.27□□□□□ -1.57
MSH3P25336 RGI1YER067W 486 nt5.27□□□□□ -1.57
MSH3P25336 NSA2YER126C 786 nt5.27□□□□□ -1.57
MSH3P25336 LOH1YJL038C 660 nt5.27□□□□□ -1.57
MSH3P25336 YKL023C-AYKL023C-A 228 nt5.27□□□□□ -1.57
MSH3P25336 YAL044W-AYAL044W-A 333 nt5.27□□□□□ -1.57
Retrieved 100 of 7,029 protein–RNA pairs in 62.2 ms