Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.68■□□□□ 0.58
SFTPBP07988 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SFTPBP07988 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SFTPBP07988 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.68■□□□□ 0.58
SFTPBP07988 AC019069.1-201ENST00000610008 1333 ntBASIC18.68■□□□□ 0.58
SFTPBP07988 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SFTPBP07988 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SFTPBP07988 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SFTPBP07988 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.67■□□□□ 0.58
SFTPBP07988 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.67■□□□□ 0.58
SFTPBP07988 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.67■□□□□ 0.58
SFTPBP07988 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
SFTPBP07988 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SFTPBP07988 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SFTPBP07988 AC096631.2-201ENST00000436136 790 ntBASIC18.67■□□□□ 0.58
SFTPBP07988 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SFTPBP07988 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SFTPBP07988 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
SFTPBP07988 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
SFTPBP07988 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SFTPBP07988 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SFTPBP07988 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SFTPBP07988 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SFTPBP07988 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SFTPBP07988 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SFTPBP07988 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SFTPBP07988 AL137060.1-201ENST00000618151 2648 ntBASIC18.66■□□□□ 0.58
SFTPBP07988 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SFTPBP07988 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SFTPBP07988 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SFTPBP07988 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SFTPBP07988 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SFTPBP07988 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SFTPBP07988 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.66■□□□□ 0.58
SFTPBP07988 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SFTPBP07988 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SFTPBP07988 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SFTPBP07988 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SFTPBP07988 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SFTPBP07988 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SFTPBP07988 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.65■□□□□ 0.58
SFTPBP07988 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SFTPBP07988 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SFTPBP07988 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.65■□□□□ 0.58
SFTPBP07988 SRD5A1P1-201ENST00000442297 786 ntBASIC18.65■□□□□ 0.58
SFTPBP07988 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.65■□□□□ 0.58
SFTPBP07988 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SFTPBP07988 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SFTPBP07988 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SFTPBP07988 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.65■□□□□ 0.58
SFTPBP07988 C11orf96-202ENST00000528572 1834 ntBASIC18.65■□□□□ 0.58
SFTPBP07988 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SFTPBP07988 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
SFTPBP07988 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SFTPBP07988 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SFTPBP07988 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.64■□□□□ 0.57
SFTPBP07988 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SFTPBP07988 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.64■□□□□ 0.57
SFTPBP07988 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SFTPBP07988 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SFTPBP07988 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SFTPBP07988 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SFTPBP07988 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SFTPBP07988 AL139246.5-201ENST00000606645 996 ntBASIC18.64■□□□□ 0.57
SFTPBP07988 AC110285.6-201ENST00000617652 491 ntBASIC18.64■□□□□ 0.57
SFTPBP07988 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.64■□□□□ 0.57
SFTPBP07988 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SFTPBP07988 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SFTPBP07988 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SFTPBP07988 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SFTPBP07988 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.64■□□□□ 0.57
SFTPBP07988 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SFTPBP07988 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SFTPBP07988 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
SFTPBP07988 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.63■□□□□ 0.57
SFTPBP07988 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SFTPBP07988 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SFTPBP07988 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SFTPBP07988 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SFTPBP07988 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.63■□□□□ 0.57
SFTPBP07988 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SFTPBP07988 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SFTPBP07988 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SFTPBP07988 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SFTPBP07988 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SFTPBP07988 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SFTPBP07988 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SFTPBP07988 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SFTPBP07988 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.62■□□□□ 0.57
SFTPBP07988 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SFTPBP07988 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SFTPBP07988 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SFTPBP07988 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SFTPBP07988 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.62■□□□□ 0.57
SFTPBP07988 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SFTPBP07988 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SFTPBP07988 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SFTPBP07988 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.62■□□□□ 0.57
SFTPBP07988 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SFTPBP07988 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms