Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.93■□□□□ 0.62
RHBDD3Q9Y3P4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.93■□□□□ 0.62
RHBDD3Q9Y3P4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.93■□□□□ 0.62
RHBDD3Q9Y3P4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.93■□□□□ 0.62
RHBDD3Q9Y3P4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RHBDD3Q9Y3P4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RHBDD3Q9Y3P4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RHBDD3Q9Y3P4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.93■□□□□ 0.62
RHBDD3Q9Y3P4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.93■□□□□ 0.62
RHBDD3Q9Y3P4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RHBDD3Q9Y3P4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RHBDD3Q9Y3P4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RHBDD3Q9Y3P4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.93■□□□□ 0.62
RHBDD3Q9Y3P4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.93■□□□□ 0.62
RHBDD3Q9Y3P4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RHBDD3Q9Y3P4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RHBDD3Q9Y3P4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RHBDD3Q9Y3P4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RHBDD3Q9Y3P4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RHBDD3Q9Y3P4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RHBDD3Q9Y3P4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RHBDD3Q9Y3P4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RHBDD3Q9Y3P4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.92■□□□□ 0.62
RHBDD3Q9Y3P4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
RHBDD3Q9Y3P4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.92■□□□□ 0.62
RHBDD3Q9Y3P4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.92■□□□□ 0.62
RHBDD3Q9Y3P4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RHBDD3Q9Y3P4 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.92■□□□□ 0.62
RHBDD3Q9Y3P4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RHBDD3Q9Y3P4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RHBDD3Q9Y3P4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RHBDD3Q9Y3P4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RHBDD3Q9Y3P4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
RHBDD3Q9Y3P4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RHBDD3Q9Y3P4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.91■□□□□ 0.62
RHBDD3Q9Y3P4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RHBDD3Q9Y3P4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RHBDD3Q9Y3P4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RHBDD3Q9Y3P4 AC006455.2-201ENST00000429931 906 ntBASIC18.91■□□□□ 0.62
RHBDD3Q9Y3P4 AL512631.2-201ENST00000604634 923 ntBASIC18.91■□□□□ 0.62
RHBDD3Q9Y3P4 AC099791.2-201ENST00000605725 427 ntBASIC18.91■□□□□ 0.62
RHBDD3Q9Y3P4 AL499627.2-201ENST00000606283 725 ntBASIC18.91■□□□□ 0.62
RHBDD3Q9Y3P4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RHBDD3Q9Y3P4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
RHBDD3Q9Y3P4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RHBDD3Q9Y3P4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
RHBDD3Q9Y3P4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RHBDD3Q9Y3P4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.9■□□□□ 0.62
RHBDD3Q9Y3P4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.9■□□□□ 0.62
RHBDD3Q9Y3P4 AC010542.4-201ENST00000563151 1910 ntBASIC18.9■□□□□ 0.62
RHBDD3Q9Y3P4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RHBDD3Q9Y3P4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RHBDD3Q9Y3P4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RHBDD3Q9Y3P4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.9■□□□□ 0.62
RHBDD3Q9Y3P4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RHBDD3Q9Y3P4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RHBDD3Q9Y3P4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RHBDD3Q9Y3P4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RHBDD3Q9Y3P4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.9■□□□□ 0.62
RHBDD3Q9Y3P4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RHBDD3Q9Y3P4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RHBDD3Q9Y3P4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.62
RHBDD3Q9Y3P4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 AC026310.3-201ENST00000625186 2373 ntBASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 LINC01960-201ENST00000563759 1884 ntBASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 SRD5A1P1-201ENST00000442297 786 ntBASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RHBDD3Q9Y3P4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.88■□□□□ 0.61
RHBDD3Q9Y3P4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.88■□□□□ 0.61
RHBDD3Q9Y3P4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.88■□□□□ 0.61
RHBDD3Q9Y3P4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RHBDD3Q9Y3P4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms