Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
LYSMD4Q5XG99 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LYSMD4Q5XG99 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LYSMD4Q5XG99 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.46■■□□□ 1.03
LYSMD4Q5XG99 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LYSMD4Q5XG99 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LYSMD4Q5XG99 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.46■■□□□ 1.03
LYSMD4Q5XG99 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.46■■□□□ 1.03
LYSMD4Q5XG99 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
LYSMD4Q5XG99 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
LYSMD4Q5XG99 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.45■■□□□ 1.03
LYSMD4Q5XG99 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.03
LYSMD4Q5XG99 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.45■■□□□ 1.02
LYSMD4Q5XG99 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LYSMD4Q5XG99 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LYSMD4Q5XG99 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LYSMD4Q5XG99 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LYSMD4Q5XG99 AC069152.1-201ENST00000438030 544 ntBASIC21.45■■□□□ 1.02
LYSMD4Q5XG99 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.45■■□□□ 1.02
LYSMD4Q5XG99 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LYSMD4Q5XG99 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LYSMD4Q5XG99 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.45■■□□□ 1.02
LYSMD4Q5XG99 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
LYSMD4Q5XG99 AC004812.2-201ENST00000611079 2094 ntBASIC21.44■■□□□ 1.02
LYSMD4Q5XG99 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.44■■□□□ 1.02
LYSMD4Q5XG99 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.44■■□□□ 1.02
LYSMD4Q5XG99 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.44■■□□□ 1.02
LYSMD4Q5XG99 FAM201B-201ENST00000458407 597 ntBASIC21.44■■□□□ 1.02
LYSMD4Q5XG99 AF201337.1-201ENST00000520239 748 ntBASIC21.44■■□□□ 1.02
LYSMD4Q5XG99 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
LYSMD4Q5XG99 AC133041.1-202ENST00000642053 222 ntBASIC21.44■■□□□ 1.02
LYSMD4Q5XG99 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
LYSMD4Q5XG99 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LYSMD4Q5XG99 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.43■■□□□ 1.02
LYSMD4Q5XG99 AL139125.2-201ENST00000623134 1869 ntBASIC21.43■■□□□ 1.02
LYSMD4Q5XG99 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LYSMD4Q5XG99 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LYSMD4Q5XG99 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LYSMD4Q5XG99 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LYSMD4Q5XG99 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.43■■□□□ 1.02
LYSMD4Q5XG99 MIR4651-201ENST00000582622 73 ntBASIC21.43■■□□□ 1.02
LYSMD4Q5XG99 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LYSMD4Q5XG99 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LYSMD4Q5XG99 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LYSMD4Q5XG99 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LYSMD4Q5XG99 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
LYSMD4Q5XG99 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
LYSMD4Q5XG99 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LYSMD4Q5XG99 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
LYSMD4Q5XG99 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LYSMD4Q5XG99 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LYSMD4Q5XG99 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
LYSMD4Q5XG99 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
LYSMD4Q5XG99 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.42■■□□□ 1.02
LYSMD4Q5XG99 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LYSMD4Q5XG99 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LYSMD4Q5XG99 AC105036.2-201ENST00000569468 176 ntBASIC21.42■■□□□ 1.02
LYSMD4Q5XG99 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.42■■□□□ 1.02
LYSMD4Q5XG99 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
LYSMD4Q5XG99 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.42■■□□□ 1.02
LYSMD4Q5XG99 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.41■■□□□ 1.02
LYSMD4Q5XG99 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LYSMD4Q5XG99 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
LYSMD4Q5XG99 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.41■■□□□ 1.02
LYSMD4Q5XG99 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
LYSMD4Q5XG99 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.41■■□□□ 1.02
LYSMD4Q5XG99 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.41■■□□□ 1.02
LYSMD4Q5XG99 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.41■■□□□ 1.02
LYSMD4Q5XG99 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
LYSMD4Q5XG99 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LYSMD4Q5XG99 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
LYSMD4Q5XG99 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LYSMD4Q5XG99 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LYSMD4Q5XG99 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LYSMD4Q5XG99 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
LYSMD4Q5XG99 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LYSMD4Q5XG99 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
LYSMD4Q5XG99 CNN2P6-201ENST00000439038 900 ntBASIC21.4■■□□□ 1.02
LYSMD4Q5XG99 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.4■■□□□ 1.02
LYSMD4Q5XG99 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.4■■□□□ 1.02
LYSMD4Q5XG99 AC133552.2-202ENST00000575694 574 ntBASIC21.4■■□□□ 1.02
LYSMD4Q5XG99 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.4■■□□□ 1.02
LYSMD4Q5XG99 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.4■■□□□ 1.02
LYSMD4Q5XG99 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
LYSMD4Q5XG99 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
LYSMD4Q5XG99 AC055733.4-201ENST00000638462 1354 ntBASIC21.39■■□□□ 1.02
LYSMD4Q5XG99 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LYSMD4Q5XG99 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
LYSMD4Q5XG99 AC073210.2-201ENST00000430369 194 ntBASIC21.39■■□□□ 1.01
LYSMD4Q5XG99 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.39■■□□□ 1.01
LYSMD4Q5XG99 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.39■■□□□ 1.01
LYSMD4Q5XG99 AC010536.3-201ENST00000620306 533 ntBASIC21.39■■□□□ 1.01
LYSMD4Q5XG99 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
LYSMD4Q5XG99 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
LYSMD4Q5XG99 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LYSMD4Q5XG99 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LYSMD4Q5XG99 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
LYSMD4Q5XG99 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.38■■□□□ 1.01
LYSMD4Q5XG99 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LYSMD4Q5XG99 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms