Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
FAM78BQ5VT40 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM78BQ5VT40 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.13■□□□□ 0.33
FAM78BQ5VT40 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.13■□□□□ 0.33
FAM78BQ5VT40 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM78BQ5VT40 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
FAM78BQ5VT40 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FAM78BQ5VT40 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.13■□□□□ 0.33
FAM78BQ5VT40 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM78BQ5VT40 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM78BQ5VT40 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
FAM78BQ5VT40 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM78BQ5VT40 AC010542.4-201ENST00000563151 1910 ntBASIC17.13■□□□□ 0.33
FAM78BQ5VT40 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
FAM78BQ5VT40 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM78BQ5VT40 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FAM78BQ5VT40 KRT8P33-201ENST00000508125 1423 ntBASIC17.13■□□□□ 0.33
FAM78BQ5VT40 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM78BQ5VT40 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FAM78BQ5VT40 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM78BQ5VT40 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FAM78BQ5VT40 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM78BQ5VT40 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FAM78BQ5VT40 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM78BQ5VT40 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM78BQ5VT40 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
FAM78BQ5VT40 MIR4281-201ENST00000580852 62 ntBASIC17.12■□□□□ 0.33
FAM78BQ5VT40 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FAM78BQ5VT40 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FAM78BQ5VT40 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FAM78BQ5VT40 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FAM78BQ5VT40 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.12■□□□□ 0.33
FAM78BQ5VT40 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
FAM78BQ5VT40 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
FAM78BQ5VT40 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
FAM78BQ5VT40 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM78BQ5VT40 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM78BQ5VT40 KRT18P24-201ENST00000344739 1156 ntBASIC17.11■□□□□ 0.33
FAM78BQ5VT40 YBX1P4-201ENST00000392794 808 ntBASIC17.11■□□□□ 0.33
FAM78BQ5VT40 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
FAM78BQ5VT40 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.11■□□□□ 0.33
FAM78BQ5VT40 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM78BQ5VT40 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM78BQ5VT40 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
FAM78BQ5VT40 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
FAM78BQ5VT40 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FAM78BQ5VT40 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM78BQ5VT40 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FAM78BQ5VT40 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FAM78BQ5VT40 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM78BQ5VT40 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.1■□□□□ 0.33
FAM78BQ5VT40 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM78BQ5VT40 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.1■□□□□ 0.33
FAM78BQ5VT40 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.1■□□□□ 0.33
FAM78BQ5VT40 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM78BQ5VT40 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM78BQ5VT40 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM78BQ5VT40 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
FAM78BQ5VT40 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM78BQ5VT40 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.1■□□□□ 0.33
FAM78BQ5VT40 MIR4508-201ENST00000584178 70 ntBASIC17.1■□□□□ 0.33
FAM78BQ5VT40 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.1■□□□□ 0.33
FAM78BQ5VT40 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
FAM78BQ5VT40 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
FAM78BQ5VT40 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FAM78BQ5VT40 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.1■□□□□ 0.33
FAM78BQ5VT40 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.1■□□□□ 0.33
FAM78BQ5VT40 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.1■□□□□ 0.33
FAM78BQ5VT40 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
FAM78BQ5VT40 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
FAM78BQ5VT40 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM78BQ5VT40 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FAM78BQ5VT40 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FAM78BQ5VT40 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.09■□□□□ 0.33
FAM78BQ5VT40 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FAM78BQ5VT40 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM78BQ5VT40 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FAM78BQ5VT40 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.09■□□□□ 0.33
FAM78BQ5VT40 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM78BQ5VT40 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FAM78BQ5VT40 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM78BQ5VT40 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM78BQ5VT40 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.09■□□□□ 0.33
FAM78BQ5VT40 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM78BQ5VT40 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
FAM78BQ5VT40 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FAM78BQ5VT40 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FAM78BQ5VT40 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.09■□□□□ 0.33
FAM78BQ5VT40 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FAM78BQ5VT40 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
FAM78BQ5VT40 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
FAM78BQ5VT40 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
FAM78BQ5VT40 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
FAM78BQ5VT40 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
FAM78BQ5VT40 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.08■□□□□ 0.33
FAM78BQ5VT40 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
FAM78BQ5VT40 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
FAM78BQ5VT40 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
FAM78BQ5VT40 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
FAM78BQ5VT40 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms