Protein–RNA interactions for Protein: A2RU48

SMCO3, Single-pass membrane and coiled-coil domain-containing protein 3, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3A2RU48 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
SMCO3A2RU48 AC120024.1-201ENST00000562672 995 ntBASIC17.56■□□□□ 0.4
SMCO3A2RU48 U85056.1-201ENST00000616429 682 ntBASIC17.56■□□□□ 0.4
SMCO3A2RU48 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SMCO3A2RU48 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SMCO3A2RU48 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMCO3A2RU48 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMCO3A2RU48 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SMCO3A2RU48 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMCO3A2RU48 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMCO3A2RU48 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.55■□□□□ 0.4
SMCO3A2RU48 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMCO3A2RU48 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.55■□□□□ 0.4
SMCO3A2RU48 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMCO3A2RU48 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMCO3A2RU48 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMCO3A2RU48 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMCO3A2RU48 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMCO3A2RU48 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC17.55■□□□□ 0.4
SMCO3A2RU48 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SMCO3A2RU48 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMCO3A2RU48 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMCO3A2RU48 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMCO3A2RU48 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMCO3A2RU48 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMCO3A2RU48 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMCO3A2RU48 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMCO3A2RU48 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.54■□□□□ 0.4
SMCO3A2RU48 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMCO3A2RU48 HCG11-201ENST00000411553 5696 ntBASIC17.54■□□□□ 0.4
SMCO3A2RU48 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SMCO3A2RU48 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.54■□□□□ 0.4
SMCO3A2RU48 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMCO3A2RU48 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC17.54■□□□□ 0.4
SMCO3A2RU48 DUX4L18-201ENST00000553347 1267 ntBASIC17.54■□□□□ 0.4
SMCO3A2RU48 THA1P-201ENST00000590384 1145 ntBASIC17.54■□□□□ 0.4
SMCO3A2RU48 BHLHE23-202ENST00000612929 1109 ntBASIC17.54■□□□□ 0.4
SMCO3A2RU48 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMCO3A2RU48 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SMCO3A2RU48 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMCO3A2RU48 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
SMCO3A2RU48 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMCO3A2RU48 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.54■□□□□ 0.4
SMCO3A2RU48 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.53■□□□□ 0.4
SMCO3A2RU48 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMCO3A2RU48 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMCO3A2RU48 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.53■□□□□ 0.4
SMCO3A2RU48 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMCO3A2RU48 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMCO3A2RU48 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMCO3A2RU48 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMCO3A2RU48 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMCO3A2RU48 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMCO3A2RU48 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMCO3A2RU48 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMCO3A2RU48 RARRES2P2-201ENST00000394842 485 ntBASIC17.53■□□□□ 0.4
SMCO3A2RU48 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMCO3A2RU48 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.53■□□□□ 0.4
SMCO3A2RU48 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMCO3A2RU48 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.53■□□□□ 0.4
SMCO3A2RU48 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.53■□□□□ 0.4
SMCO3A2RU48 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMCO3A2RU48 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMCO3A2RU48 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.53■□□□□ 0.4
SMCO3A2RU48 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.52■□□□□ 0.4
SMCO3A2RU48 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMCO3A2RU48 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMCO3A2RU48 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.52■□□□□ 0.4
SMCO3A2RU48 MTX2-204ENST00000443241 799 ntTSL 3 BASIC17.52■□□□□ 0.4
SMCO3A2RU48 AC004448.1-201ENST00000458332 883 ntBASIC17.52■□□□□ 0.4
SMCO3A2RU48 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.52■□□□□ 0.4
SMCO3A2RU48 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMCO3A2RU48 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMCO3A2RU48 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMCO3A2RU48 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMCO3A2RU48 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
SMCO3A2RU48 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.52■□□□□ 0.39
SMCO3A2RU48 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMCO3A2RU48 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMCO3A2RU48 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SMCO3A2RU48 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMCO3A2RU48 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMCO3A2RU48 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.51■□□□□ 0.39
SMCO3A2RU48 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMCO3A2RU48 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMCO3A2RU48 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SMCO3A2RU48 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC17.51■□□□□ 0.39
SMCO3A2RU48 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.51■□□□□ 0.39
SMCO3A2RU48 AC019171.1-201ENST00000601251 1056 ntBASIC17.51■□□□□ 0.39
SMCO3A2RU48 AF131216.4-201ENST00000638924 1588 ntBASIC17.51■□□□□ 0.39
SMCO3A2RU48 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMCO3A2RU48 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.51■□□□□ 0.39
SMCO3A2RU48 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.51■□□□□ 0.39
SMCO3A2RU48 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SMCO3A2RU48 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SMCO3A2RU48 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMCO3A2RU48 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.51■□□□□ 0.39
SMCO3A2RU48 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SMCO3A2RU48 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SMCO3A2RU48 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms