Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC71LQ8N9Z2 AC074183.2-201ENST00000623112 922 ntBASIC18.07■□□□□ 0.48
CCDC71LQ8N9Z2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC71LQ8N9Z2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC71LQ8N9Z2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC71LQ8N9Z2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
CCDC71LQ8N9Z2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC71LQ8N9Z2 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC71LQ8N9Z2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC71LQ8N9Z2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
CCDC71LQ8N9Z2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
CCDC71LQ8N9Z2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC71LQ8N9Z2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC71LQ8N9Z2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CCDC71LQ8N9Z2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC71LQ8N9Z2 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CCDC71LQ8N9Z2 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC71LQ8N9Z2 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
CCDC71LQ8N9Z2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCDC71LQ8N9Z2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC71LQ8N9Z2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC71LQ8N9Z2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC71LQ8N9Z2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC71LQ8N9Z2 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC71LQ8N9Z2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC71LQ8N9Z2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC71LQ8N9Z2 DUX4L18-201ENST00000553347 1267 ntBASIC18.05■□□□□ 0.48
CCDC71LQ8N9Z2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCDC71LQ8N9Z2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CCDC71LQ8N9Z2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC71LQ8N9Z2 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC71LQ8N9Z2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC71LQ8N9Z2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CCDC71LQ8N9Z2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CCDC71LQ8N9Z2 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC71LQ8N9Z2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC71LQ8N9Z2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC71LQ8N9Z2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC71LQ8N9Z2 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC71LQ8N9Z2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC71LQ8N9Z2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC71LQ8N9Z2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC71LQ8N9Z2 SNX5-217ENST00000606557 1087 ntBASIC18.04■□□□□ 0.48
CCDC71LQ8N9Z2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC71LQ8N9Z2 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC71LQ8N9Z2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC71LQ8N9Z2 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC71LQ8N9Z2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC71LQ8N9Z2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC71LQ8N9Z2 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC71LQ8N9Z2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC71LQ8N9Z2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC71LQ8N9Z2 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC71LQ8N9Z2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CCDC71LQ8N9Z2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC71LQ8N9Z2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC71LQ8N9Z2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC71LQ8N9Z2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
CCDC71LQ8N9Z2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC71LQ8N9Z2 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC71LQ8N9Z2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC71LQ8N9Z2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CCDC71LQ8N9Z2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC71LQ8N9Z2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.03■□□□□ 0.48
CCDC71LQ8N9Z2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC71LQ8N9Z2 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC71LQ8N9Z2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CCDC71LQ8N9Z2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CCDC71LQ8N9Z2 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC71LQ8N9Z2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC71LQ8N9Z2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.02■□□□□ 0.48
CCDC71LQ8N9Z2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC71LQ8N9Z2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC71LQ8N9Z2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC71LQ8N9Z2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC71LQ8N9Z2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC71LQ8N9Z2 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC71LQ8N9Z2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC71LQ8N9Z2 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.02■□□□□ 0.48
CCDC71LQ8N9Z2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC71LQ8N9Z2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC71LQ8N9Z2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.02■□□□□ 0.47
CCDC71LQ8N9Z2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC71LQ8N9Z2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC71LQ8N9Z2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC71LQ8N9Z2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC71LQ8N9Z2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC71LQ8N9Z2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC71LQ8N9Z2 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CCDC71LQ8N9Z2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC71LQ8N9Z2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.01■□□□□ 0.47
CCDC71LQ8N9Z2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.01■□□□□ 0.47
CCDC71LQ8N9Z2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.01■□□□□ 0.47
CCDC71LQ8N9Z2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC71LQ8N9Z2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CCDC71LQ8N9Z2 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC71LQ8N9Z2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC71LQ8N9Z2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.01■□□□□ 0.47
CCDC71LQ8N9Z2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18■□□□□ 0.47
CCDC71LQ8N9Z2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms