Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNAP47Q5SQN1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SNAP47Q5SQN1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.1■□□□□ 0.97
SNAP47Q5SQN1 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SNAP47Q5SQN1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNAP47Q5SQN1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNAP47Q5SQN1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SNAP47Q5SQN1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SNAP47Q5SQN1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.1■□□□□ 0.97
SNAP47Q5SQN1 NTF6G-201ENST00000591094 616 ntBASIC21.1■□□□□ 0.97
SNAP47Q5SQN1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SNAP47Q5SQN1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SNAP47Q5SQN1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNAP47Q5SQN1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SNAP47Q5SQN1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
SNAP47Q5SQN1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNAP47Q5SQN1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SNAP47Q5SQN1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNAP47Q5SQN1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNAP47Q5SQN1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.09■□□□□ 0.97
SNAP47Q5SQN1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.09■□□□□ 0.97
SNAP47Q5SQN1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.09■□□□□ 0.97
SNAP47Q5SQN1 AL137784.2-201ENST00000607332 1000 ntBASIC21.09■□□□□ 0.97
SNAP47Q5SQN1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SNAP47Q5SQN1 AC087239.1-201ENST00000622671 572 ntBASIC21.09■□□□□ 0.97
SNAP47Q5SQN1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SNAP47Q5SQN1 AC068473.5-201ENST00000616428 2072 ntBASIC21.09■□□□□ 0.97
SNAP47Q5SQN1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
SNAP47Q5SQN1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNAP47Q5SQN1 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNAP47Q5SQN1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNAP47Q5SQN1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
SNAP47Q5SQN1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.09■□□□□ 0.97
SNAP47Q5SQN1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SNAP47Q5SQN1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SNAP47Q5SQN1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.08■□□□□ 0.97
SNAP47Q5SQN1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SNAP47Q5SQN1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.08■□□□□ 0.97
SNAP47Q5SQN1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.08■□□□□ 0.97
SNAP47Q5SQN1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
SNAP47Q5SQN1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SNAP47Q5SQN1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.08■□□□□ 0.96
SNAP47Q5SQN1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.08■□□□□ 0.96
SNAP47Q5SQN1 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
SNAP47Q5SQN1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
SNAP47Q5SQN1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SNAP47Q5SQN1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SNAP47Q5SQN1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.07■□□□□ 0.96
SNAP47Q5SQN1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SNAP47Q5SQN1 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SNAP47Q5SQN1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SNAP47Q5SQN1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SNAP47Q5SQN1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SNAP47Q5SQN1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SNAP47Q5SQN1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SNAP47Q5SQN1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SNAP47Q5SQN1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.07■□□□□ 0.96
SNAP47Q5SQN1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SNAP47Q5SQN1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.07■□□□□ 0.96
SNAP47Q5SQN1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SNAP47Q5SQN1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.07■□□□□ 0.96
SNAP47Q5SQN1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.07■□□□□ 0.96
SNAP47Q5SQN1 TERF1P2-201ENST00000583350 1212 ntBASIC21.07■□□□□ 0.96
SNAP47Q5SQN1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.07■□□□□ 0.96
SNAP47Q5SQN1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNAP47Q5SQN1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SNAP47Q5SQN1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.06■□□□□ 0.96
SNAP47Q5SQN1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SNAP47Q5SQN1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNAP47Q5SQN1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNAP47Q5SQN1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.06■□□□□ 0.96
SNAP47Q5SQN1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNAP47Q5SQN1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.06■□□□□ 0.96
SNAP47Q5SQN1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
SNAP47Q5SQN1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNAP47Q5SQN1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SNAP47Q5SQN1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNAP47Q5SQN1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.06■□□□□ 0.96
SNAP47Q5SQN1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNAP47Q5SQN1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SNAP47Q5SQN1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SNAP47Q5SQN1 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.05■□□□□ 0.96
SNAP47Q5SQN1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNAP47Q5SQN1 AC004911.1-201ENST00000416316 871 ntBASIC21.05■□□□□ 0.96
SNAP47Q5SQN1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SNAP47Q5SQN1 AC010141.3-201ENST00000456659 717 ntBASIC21.05■□□□□ 0.96
SNAP47Q5SQN1 AC068587.7-201ENST00000641602 218 ntBASIC21.05■□□□□ 0.96
SNAP47Q5SQN1 ANOS2P-203ENST00000472227 1816 ntBASIC21.05■□□□□ 0.96
SNAP47Q5SQN1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNAP47Q5SQN1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNAP47Q5SQN1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.05■□□□□ 0.96
SNAP47Q5SQN1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNAP47Q5SQN1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNAP47Q5SQN1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNAP47Q5SQN1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SNAP47Q5SQN1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.04■□□□□ 0.96
SNAP47Q5SQN1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.04■□□□□ 0.96
SNAP47Q5SQN1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.04■□□□□ 0.96
SNAP47Q5SQN1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.04■□□□□ 0.96
SNAP47Q5SQN1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms