Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNAI3Q3KNW1 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNAI3Q3KNW1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SNAI3Q3KNW1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SNAI3Q3KNW1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SNAI3Q3KNW1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
SNAI3Q3KNW1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SNAI3Q3KNW1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SNAI3Q3KNW1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNAI3Q3KNW1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNAI3Q3KNW1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SNAI3Q3KNW1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
SNAI3Q3KNW1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNAI3Q3KNW1 AC010525.1-201ENST00000585559 441 ntBASIC18.89■□□□□ 0.61
SNAI3Q3KNW1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.89■□□□□ 0.61
SNAI3Q3KNW1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.89■□□□□ 0.61
SNAI3Q3KNW1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.89■□□□□ 0.61
SNAI3Q3KNW1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNAI3Q3KNW1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNAI3Q3KNW1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNAI3Q3KNW1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNAI3Q3KNW1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNAI3Q3KNW1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNAI3Q3KNW1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNAI3Q3KNW1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNAI3Q3KNW1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNAI3Q3KNW1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNAI3Q3KNW1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.88■□□□□ 0.61
SNAI3Q3KNW1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.88■□□□□ 0.61
SNAI3Q3KNW1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNAI3Q3KNW1 AL138724.1-201ENST00000606771 1088 ntBASIC18.88■□□□□ 0.61
SNAI3Q3KNW1 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SNAI3Q3KNW1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SNAI3Q3KNW1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.88■□□□□ 0.61
SNAI3Q3KNW1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SNAI3Q3KNW1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNAI3Q3KNW1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNAI3Q3KNW1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNAI3Q3KNW1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.87■□□□□ 0.61
SNAI3Q3KNW1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNAI3Q3KNW1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SNAI3Q3KNW1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
SNAI3Q3KNW1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNAI3Q3KNW1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.87■□□□□ 0.61
SNAI3Q3KNW1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.87■□□□□ 0.61
SNAI3Q3KNW1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.87■□□□□ 0.61
SNAI3Q3KNW1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.87■□□□□ 0.61
SNAI3Q3KNW1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.87■□□□□ 0.61
SNAI3Q3KNW1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNAI3Q3KNW1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNAI3Q3KNW1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.86■□□□□ 0.61
SNAI3Q3KNW1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
SNAI3Q3KNW1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SNAI3Q3KNW1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.86■□□□□ 0.61
SNAI3Q3KNW1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.86■□□□□ 0.61
SNAI3Q3KNW1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
SNAI3Q3KNW1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNAI3Q3KNW1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNAI3Q3KNW1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.86■□□□□ 0.61
SNAI3Q3KNW1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNAI3Q3KNW1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
SNAI3Q3KNW1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.86■□□□□ 0.61
SNAI3Q3KNW1 AC136469.2-201ENST00000623944 1028 ntBASIC18.86■□□□□ 0.61
SNAI3Q3KNW1 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.86■□□□□ 0.61
SNAI3Q3KNW1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.86■□□□□ 0.61
SNAI3Q3KNW1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNAI3Q3KNW1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNAI3Q3KNW1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SNAI3Q3KNW1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNAI3Q3KNW1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNAI3Q3KNW1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNAI3Q3KNW1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNAI3Q3KNW1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNAI3Q3KNW1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.85■□□□□ 0.61
SNAI3Q3KNW1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNAI3Q3KNW1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNAI3Q3KNW1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNAI3Q3KNW1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNAI3Q3KNW1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNAI3Q3KNW1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNAI3Q3KNW1 AC011298.3-201ENST00000615796 283 ntBASIC18.85■□□□□ 0.61
SNAI3Q3KNW1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SNAI3Q3KNW1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.85■□□□□ 0.61
SNAI3Q3KNW1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SNAI3Q3KNW1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SNAI3Q3KNW1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.85■□□□□ 0.61
SNAI3Q3KNW1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNAI3Q3KNW1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNAI3Q3KNW1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNAI3Q3KNW1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNAI3Q3KNW1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SNAI3Q3KNW1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNAI3Q3KNW1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SNAI3Q3KNW1 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.84■□□□□ 0.61
SNAI3Q3KNW1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.84■□□□□ 0.61
SNAI3Q3KNW1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNAI3Q3KNW1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SNAI3Q3KNW1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.84■□□□□ 0.61
SNAI3Q3KNW1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.84■□□□□ 0.61
SNAI3Q3KNW1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms