Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CTSDP07339 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CTSDP07339 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTSDP07339 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTSDP07339 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTSDP07339 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.04■□□□□ 0.48
CTSDP07339 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTSDP07339 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTSDP07339 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.03■□□□□ 0.48
CTSDP07339 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CTSDP07339 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTSDP07339 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CTSDP07339 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTSDP07339 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CTSDP07339 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CTSDP07339 DUX4L18-201ENST00000553347 1267 ntBASIC18.03■□□□□ 0.48
CTSDP07339 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.03■□□□□ 0.48
CTSDP07339 Z98882.1-201ENST00000622160 2253 ntBASIC18.03■□□□□ 0.48
CTSDP07339 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.03■□□□□ 0.48
CTSDP07339 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTSDP07339 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTSDP07339 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTSDP07339 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CTSDP07339 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CTSDP07339 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTSDP07339 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTSDP07339 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTSDP07339 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CTSDP07339 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.03■□□□□ 0.48
CTSDP07339 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.02■□□□□ 0.48
CTSDP07339 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.02■□□□□ 0.48
CTSDP07339 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTSDP07339 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTSDP07339 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTSDP07339 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.02■□□□□ 0.48
CTSDP07339 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTSDP07339 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.02■□□□□ 0.48
CTSDP07339 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CTSDP07339 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTSDP07339 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.02■□□□□ 0.48
CTSDP07339 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.02■□□□□ 0.48
CTSDP07339 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.02■□□□□ 0.48
CTSDP07339 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CTSDP07339 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTSDP07339 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CTSDP07339 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CTSDP07339 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTSDP07339 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.01■□□□□ 0.47
CTSDP07339 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTSDP07339 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTSDP07339 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTSDP07339 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.01■□□□□ 0.47
CTSDP07339 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CTSDP07339 BHLHE23-202ENST00000612929 1109 ntBASIC18.01■□□□□ 0.47
CTSDP07339 AC074183.2-201ENST00000623112 922 ntBASIC18.01■□□□□ 0.47
CTSDP07339 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTSDP07339 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTSDP07339 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CTSDP07339 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTSDP07339 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CTSDP07339 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTSDP07339 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.01■□□□□ 0.47
CTSDP07339 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CTSDP07339 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CTSDP07339 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CTSDP07339 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CTSDP07339 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18■□□□□ 0.47
CTSDP07339 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CTSDP07339 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CTSDP07339 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CTSDP07339 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18■□□□□ 0.47
CTSDP07339 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18■□□□□ 0.47
CTSDP07339 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CTSDP07339 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CTSDP07339 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CTSDP07339 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CTSDP07339 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTSDP07339 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.99■□□□□ 0.47
CTSDP07339 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CTSDP07339 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CTSDP07339 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTSDP07339 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CTSDP07339 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTSDP07339 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.99■□□□□ 0.47
CTSDP07339 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.99■□□□□ 0.47
CTSDP07339 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CTSDP07339 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTSDP07339 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTSDP07339 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CTSDP07339 FEM1AP4-201ENST00000443167 1987 ntBASIC17.99■□□□□ 0.47
CTSDP07339 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.99■□□□□ 0.47
CTSDP07339 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CTSDP07339 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CTSDP07339 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CTSDP07339 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CTSDP07339 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTSDP07339 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CTSDP07339 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTSDP07339 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTSDP07339 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms