Protein–RNA interactions for Protein: O43303

CCP110, Centriolar coiled-coil protein of 110 kDa, humanhuman

Predictions only

Length 1,012 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110O43303 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.84■■□□□ 1.41
CCP110O43303 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCP110O43303 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCP110O43303 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.84■■□□□ 1.41
CCP110O43303 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCP110O43303 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCP110O43303 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23.84■■□□□ 1.41
CCP110O43303 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCP110O43303 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
CCP110O43303 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.83■■□□□ 1.41
CCP110O43303 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCP110O43303 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CCP110O43303 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.83■■□□□ 1.4
CCP110O43303 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.82■■□□□ 1.4
CCP110O43303 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCP110O43303 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CCP110O43303 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.82■■□□□ 1.4
CCP110O43303 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCP110O43303 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCP110O43303 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.82■■□□□ 1.4
CCP110O43303 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCP110O43303 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CCP110O43303 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CCP110O43303 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCP110O43303 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCP110O43303 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCP110O43303 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.81■■□□□ 1.4
CCP110O43303 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCP110O43303 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCP110O43303 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CCP110O43303 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.81■■□□□ 1.4
CCP110O43303 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CCP110O43303 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCP110O43303 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CCP110O43303 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.8■■□□□ 1.4
CCP110O43303 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CCP110O43303 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCP110O43303 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.8■■□□□ 1.4
CCP110O43303 Z92544.1-202ENST00000571933 1220 ntBASIC23.8■■□□□ 1.4
CCP110O43303 AC244015.2-201ENST00000616358 1861 ntBASIC23.8■■□□□ 1.4
CCP110O43303 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCP110O43303 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
CCP110O43303 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
CCP110O43303 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCP110O43303 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCP110O43303 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCP110O43303 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.8■■□□□ 1.4
CCP110O43303 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC23.8■■□□□ 1.4
CCP110O43303 AC073130.3-201ENST00000624389 2278 ntBASIC23.8■■□□□ 1.4
CCP110O43303 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CCP110O43303 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CCP110O43303 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCP110O43303 AC005229.4-201ENST00000610085 2198 ntBASIC23.79■■□□□ 1.4
CCP110O43303 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCP110O43303 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCP110O43303 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC23.79■■□□□ 1.4
CCP110O43303 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCP110O43303 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CCP110O43303 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.79■■□□□ 1.4
CCP110O43303 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCP110O43303 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCP110O43303 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCP110O43303 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCP110O43303 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC23.79■■□□□ 1.4
CCP110O43303 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
CCP110O43303 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCP110O43303 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCP110O43303 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCP110O43303 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCP110O43303 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.78■■□□□ 1.4
CCP110O43303 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.78■■□□□ 1.4
CCP110O43303 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.78■■□□□ 1.4
CCP110O43303 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.78■■□□□ 1.4
CCP110O43303 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
CCP110O43303 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCP110O43303 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCP110O43303 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCP110O43303 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCP110O43303 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCP110O43303 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CCP110O43303 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
CCP110O43303 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCP110O43303 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.77■■□□□ 1.4
CCP110O43303 AC239859.2-201ENST00000444165 318 ntBASIC23.77■■□□□ 1.4
CCP110O43303 KRT125P-201ENST00000546827 989 ntBASIC23.77■■□□□ 1.4
CCP110O43303 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.77■■□□□ 1.4
CCP110O43303 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.77■■□□□ 1.4
CCP110O43303 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCP110O43303 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCP110O43303 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCP110O43303 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCP110O43303 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCP110O43303 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC23.77■■□□□ 1.4
CCP110O43303 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
CCP110O43303 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
CCP110O43303 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCP110O43303 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
CCP110O43303 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCP110O43303 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCP110O43303 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms