Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NDUFA1O15239 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NDUFA1O15239 BEX3-202ENST00000372634 753 ntTSL 2 BASIC14.84□□□□□ -0.03
NDUFA1O15239 AC004448.1-201ENST00000458332 883 ntBASIC14.84□□□□□ -0.03
NDUFA1O15239 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NDUFA1O15239 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC14.84□□□□□ -0.03
NDUFA1O15239 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NDUFA1O15239 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NDUFA1O15239 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NDUFA1O15239 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC14.84□□□□□ -0.03
NDUFA1O15239 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NDUFA1O15239 AF131216.4-201ENST00000638924 1588 ntBASIC14.84□□□□□ -0.03
NDUFA1O15239 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
NDUFA1O15239 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NDUFA1O15239 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NDUFA1O15239 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NDUFA1O15239 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NDUFA1O15239 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC14.83□□□□□ -0.03
NDUFA1O15239 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NDUFA1O15239 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC14.83□□□□□ -0.03
NDUFA1O15239 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
NDUFA1O15239 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
NDUFA1O15239 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NDUFA1O15239 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NDUFA1O15239 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC14.83□□□□□ -0.04
NDUFA1O15239 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NDUFA1O15239 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC14.83□□□□□ -0.04
NDUFA1O15239 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC14.83□□□□□ -0.04
NDUFA1O15239 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC14.83□□□□□ -0.04
NDUFA1O15239 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
NDUFA1O15239 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NDUFA1O15239 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NDUFA1O15239 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NDUFA1O15239 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC14.83□□□□□ -0.04
NDUFA1O15239 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
NDUFA1O15239 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NDUFA1O15239 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NDUFA1O15239 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NDUFA1O15239 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
NDUFA1O15239 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NDUFA1O15239 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NDUFA1O15239 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NDUFA1O15239 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC14.82□□□□□ -0.04
NDUFA1O15239 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NDUFA1O15239 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NDUFA1O15239 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC14.82□□□□□ -0.04
NDUFA1O15239 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NDUFA1O15239 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NDUFA1O15239 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NDUFA1O15239 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NDUFA1O15239 AC244015.2-201ENST00000616358 1861 ntBASIC14.82□□□□□ -0.04
NDUFA1O15239 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NDUFA1O15239 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NDUFA1O15239 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NDUFA1O15239 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NDUFA1O15239 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NDUFA1O15239 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
NDUFA1O15239 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC14.81□□□□□ -0.04
NDUFA1O15239 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC14.81□□□□□ -0.04
NDUFA1O15239 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NDUFA1O15239 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NDUFA1O15239 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NDUFA1O15239 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
NDUFA1O15239 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
NDUFA1O15239 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC14.81□□□□□ -0.04
NDUFA1O15239 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC14.81□□□□□ -0.04
NDUFA1O15239 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NDUFA1O15239 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NDUFA1O15239 AC012354.3-201ENST00000623734 483 ntBASIC14.81□□□□□ -0.04
NDUFA1O15239 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NDUFA1O15239 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NDUFA1O15239 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NDUFA1O15239 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NDUFA1O15239 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NDUFA1O15239 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NDUFA1O15239 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC14.8□□□□□ -0.04
NDUFA1O15239 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NDUFA1O15239 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NDUFA1O15239 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NDUFA1O15239 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC14.8□□□□□ -0.04
NDUFA1O15239 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NDUFA1O15239 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NDUFA1O15239 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NDUFA1O15239 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NDUFA1O15239 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NDUFA1O15239 GUK1-208ENST00000366728 842 ntTSL 2 BASIC14.8□□□□□ -0.04
NDUFA1O15239 YBX1P4-201ENST00000392794 808 ntBASIC14.8□□□□□ -0.04
NDUFA1O15239 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC14.8□□□□□ -0.04
NDUFA1O15239 MIR4508-201ENST00000584178 70 ntBASIC14.8□□□□□ -0.04
NDUFA1O15239 PVT1_1.1-201ENST00000615125 194 ntBASIC14.8□□□□□ -0.04
NDUFA1O15239 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NDUFA1O15239 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NDUFA1O15239 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC14.8□□□□□ -0.04
NDUFA1O15239 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC14.8□□□□□ -0.04
NDUFA1O15239 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
NDUFA1O15239 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC14.8□□□□□ -0.04
NDUFA1O15239 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NDUFA1O15239 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC14.8□□□□□ -0.04
NDUFA1O15239 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NDUFA1O15239 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms