Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC26.22■■□□□ 1.79
PCDHAC2Q9Y5I4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHAC2Q9Y5I4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHAC2Q9Y5I4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC26.22■■□□□ 1.79
PCDHAC2Q9Y5I4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHAC2Q9Y5I4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
PCDHAC2Q9Y5I4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC26.22■■□□□ 1.79
PCDHAC2Q9Y5I4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC26.22■■□□□ 1.79
PCDHAC2Q9Y5I4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC26.22■■□□□ 1.79
PCDHAC2Q9Y5I4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC26.22■■□□□ 1.79
PCDHAC2Q9Y5I4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC26.22■■□□□ 1.79
PCDHAC2Q9Y5I4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHAC2Q9Y5I4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC26.22■■□□□ 1.79
PCDHAC2Q9Y5I4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHAC2Q9Y5I4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC26.22■■□□□ 1.79
PCDHAC2Q9Y5I4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHAC2Q9Y5I4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHAC2Q9Y5I4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHAC2Q9Y5I4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHAC2Q9Y5I4 DUSP8P3-201ENST00000399571 1760 ntBASIC26.21■■□□□ 1.79
PCDHAC2Q9Y5I4 AL355802.2-201ENST00000402069 882 ntBASIC26.21■■□□□ 1.79
PCDHAC2Q9Y5I4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHAC2Q9Y5I4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC26.21■■□□□ 1.79
PCDHAC2Q9Y5I4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC26.21■■□□□ 1.79
PCDHAC2Q9Y5I4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
PCDHAC2Q9Y5I4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHAC2Q9Y5I4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC26.21■■□□□ 1.79
PCDHAC2Q9Y5I4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHAC2Q9Y5I4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC26.2■■□□□ 1.79
PCDHAC2Q9Y5I4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
PCDHAC2Q9Y5I4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHAC2Q9Y5I4 AC006970.2-201ENST00000450065 779 ntBASIC26.2■■□□□ 1.78
PCDHAC2Q9Y5I4 AC079140.4-201ENST00000507448 529 ntBASIC26.2■■□□□ 1.78
PCDHAC2Q9Y5I4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
PCDHAC2Q9Y5I4 AL109923.1-201ENST00000618799 583 ntBASIC26.2■■□□□ 1.78
PCDHAC2Q9Y5I4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
PCDHAC2Q9Y5I4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC26.2■■□□□ 1.78
PCDHAC2Q9Y5I4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHAC2Q9Y5I4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
PCDHAC2Q9Y5I4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC26.19■■□□□ 1.78
PCDHAC2Q9Y5I4 MIR663A-201ENST00000385250 93 ntBASIC26.19■■□□□ 1.78
PCDHAC2Q9Y5I4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC26.19■■□□□ 1.78
PCDHAC2Q9Y5I4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHAC2Q9Y5I4 AC087239.1-201ENST00000622671 572 ntBASIC26.19■■□□□ 1.78
PCDHAC2Q9Y5I4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC26.19■■□□□ 1.78
PCDHAC2Q9Y5I4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHAC2Q9Y5I4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.19■■□□□ 1.78
PCDHAC2Q9Y5I4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHAC2Q9Y5I4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.18■■□□□ 1.78
PCDHAC2Q9Y5I4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHAC2Q9Y5I4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHAC2Q9Y5I4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHAC2Q9Y5I4 NCF1B-203ENST00000435988 1254 ntBASIC26.18■■□□□ 1.78
PCDHAC2Q9Y5I4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHAC2Q9Y5I4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHAC2Q9Y5I4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC26.18■■□□□ 1.78
PCDHAC2Q9Y5I4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC26.18■■□□□ 1.78
PCDHAC2Q9Y5I4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHAC2Q9Y5I4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHAC2Q9Y5I4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
PCDHAC2Q9Y5I4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC26.17■■□□□ 1.78
PCDHAC2Q9Y5I4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.17■■□□□ 1.78
PCDHAC2Q9Y5I4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHAC2Q9Y5I4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC26.17■■□□□ 1.78
PCDHAC2Q9Y5I4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC26.17■■□□□ 1.78
PCDHAC2Q9Y5I4 MFSD11-216ENST00000590393 1141 ntBASIC26.17■■□□□ 1.78
PCDHAC2Q9Y5I4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHAC2Q9Y5I4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHAC2Q9Y5I4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHAC2Q9Y5I4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHAC2Q9Y5I4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
PCDHAC2Q9Y5I4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHAC2Q9Y5I4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC26.16■■□□□ 1.78
PCDHAC2Q9Y5I4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC26.16■■□□□ 1.78
PCDHAC2Q9Y5I4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC26.16■■□□□ 1.78
PCDHAC2Q9Y5I4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC26.16■■□□□ 1.78
PCDHAC2Q9Y5I4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
PCDHAC2Q9Y5I4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC26.16■■□□□ 1.78
PCDHAC2Q9Y5I4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC26.16■■□□□ 1.78
PCDHAC2Q9Y5I4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHAC2Q9Y5I4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHAC2Q9Y5I4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHAC2Q9Y5I4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHAC2Q9Y5I4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHAC2Q9Y5I4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC26.15■■□□□ 1.78
PCDHAC2Q9Y5I4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHAC2Q9Y5I4 AL050303.2-201ENST00000619798 666 ntBASIC26.15■■□□□ 1.78
PCDHAC2Q9Y5I4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC26.15■■□□□ 1.78
PCDHAC2Q9Y5I4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHAC2Q9Y5I4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC26.14■■□□□ 1.78
PCDHAC2Q9Y5I4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHAC2Q9Y5I4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC26.14■■□□□ 1.78
PCDHAC2Q9Y5I4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHAC2Q9Y5I4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHAC2Q9Y5I4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC26.14■■□□□ 1.78
PCDHAC2Q9Y5I4 AC104187.1-201ENST00000607510 612 ntBASIC26.14■■□□□ 1.78
PCDHAC2Q9Y5I4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHAC2Q9Y5I4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHAC2Q9Y5I4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.77
PCDHAC2Q9Y5I4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms