Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
NDNQ99608 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
NDNQ99608 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NDNQ99608 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
NDNQ99608 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
NDNQ99608 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NDNQ99608 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NDNQ99608 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NDNQ99608 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
NDNQ99608 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
NDNQ99608 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NDNQ99608 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.8■■□□□ 1.08
NDNQ99608 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
NDNQ99608 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
NDNQ99608 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.8■■□□□ 1.08
NDNQ99608 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
NDNQ99608 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NDNQ99608 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.8■■□□□ 1.08
NDNQ99608 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
NDNQ99608 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.8■■□□□ 1.08
NDNQ99608 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NDNQ99608 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.79■■□□□ 1.08
NDNQ99608 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NDNQ99608 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NDNQ99608 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NDNQ99608 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NDNQ99608 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.79■■□□□ 1.08
NDNQ99608 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NDNQ99608 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NDNQ99608 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.79■■□□□ 1.08
NDNQ99608 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
NDNQ99608 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NDNQ99608 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.79■■□□□ 1.08
NDNQ99608 AL356441.2-201ENST00000443009 864 ntBASIC21.79■■□□□ 1.08
NDNQ99608 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NDNQ99608 AC099791.2-201ENST00000605725 427 ntBASIC21.79■■□□□ 1.08
NDNQ99608 AL499627.2-201ENST00000606283 725 ntBASIC21.79■■□□□ 1.08
NDNQ99608 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NDNQ99608 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.79■■□□□ 1.08
NDNQ99608 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.79■■□□□ 1.08
NDNQ99608 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NDNQ99608 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
NDNQ99608 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.78■■□□□ 1.08
NDNQ99608 AC092053.2-201ENST00000640557 1818 ntBASIC21.78■■□□□ 1.08
NDNQ99608 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NDNQ99608 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.78■■□□□ 1.08
NDNQ99608 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.78■■□□□ 1.08
NDNQ99608 AC241377.3-202ENST00000626088 1088 ntBASIC21.78■■□□□ 1.08
NDNQ99608 AC241585.3-202ENST00000628937 1088 ntBASIC21.78■■□□□ 1.08
NDNQ99608 AC245100.8-202ENST00000629247 1058 ntBASIC21.78■■□□□ 1.08
NDNQ99608 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
NDNQ99608 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NDNQ99608 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NDNQ99608 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
NDNQ99608 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NDNQ99608 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NDNQ99608 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NDNQ99608 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
NDNQ99608 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NDNQ99608 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NDNQ99608 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NDNQ99608 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NDNQ99608 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.77■■□□□ 1.08
NDNQ99608 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.77■■□□□ 1.08
NDNQ99608 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NDNQ99608 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NDNQ99608 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.77■■□□□ 1.08
NDNQ99608 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NDNQ99608 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
NDNQ99608 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.77■■□□□ 1.08
NDNQ99608 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.76■■□□□ 1.07
NDNQ99608 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.76■■□□□ 1.07
NDNQ99608 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NDNQ99608 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
NDNQ99608 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
NDNQ99608 pRNA.6-201ENST00000610482 90 ntBASIC21.76■■□□□ 1.07
NDNQ99608 pRNA.5-201ENST00000612139 90 ntBASIC21.76■■□□□ 1.07
NDNQ99608 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.76■■□□□ 1.07
NDNQ99608 pRNA.11-201ENST00000618423 90 ntBASIC21.76■■□□□ 1.07
NDNQ99608 pRNA.13-201ENST00000619112 90 ntBASIC21.76■■□□□ 1.07
NDNQ99608 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.76■■□□□ 1.07
NDNQ99608 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
NDNQ99608 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
NDNQ99608 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
NDNQ99608 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NDNQ99608 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NDNQ99608 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.75■■□□□ 1.07
NDNQ99608 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.75■■□□□ 1.07
NDNQ99608 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NDNQ99608 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NDNQ99608 RNF165-205ENST00000588679 2904 ntBASIC21.75■■□□□ 1.07
NDNQ99608 AC137767.1-201ENST00000602918 1920 ntBASIC21.75■■□□□ 1.07
NDNQ99608 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.75■■□□□ 1.07
NDNQ99608 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.75■■□□□ 1.07
NDNQ99608 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NDNQ99608 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.75■■□□□ 1.07
NDNQ99608 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NDNQ99608 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.75■■□□□ 1.07
NDNQ99608 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NDNQ99608 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 217.7 ms