Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TTC9CQ8N5M4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC9CQ8N5M4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC9CQ8N5M4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.22■□□□□ 0.35
TTC9CQ8N5M4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.22■□□□□ 0.35
TTC9CQ8N5M4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC9CQ8N5M4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TTC9CQ8N5M4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC9CQ8N5M4 LINC00526-201ENST00000581067 1875 ntBASIC17.22■□□□□ 0.35
TTC9CQ8N5M4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.22■□□□□ 0.35
TTC9CQ8N5M4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TTC9CQ8N5M4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC9CQ8N5M4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TTC9CQ8N5M4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC9CQ8N5M4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC9CQ8N5M4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC9CQ8N5M4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC9CQ8N5M4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC9CQ8N5M4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC9CQ8N5M4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC9CQ8N5M4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC9CQ8N5M4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TTC9CQ8N5M4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.21■□□□□ 0.35
TTC9CQ8N5M4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.21■□□□□ 0.35
TTC9CQ8N5M4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TTC9CQ8N5M4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
TTC9CQ8N5M4 OR2I1P-207ENST00000453522 948 ntBASIC17.21■□□□□ 0.35
TTC9CQ8N5M4 AC011298.3-201ENST00000615796 283 ntBASIC17.21■□□□□ 0.35
TTC9CQ8N5M4 AL031602.1-201ENST00000633169 911 ntBASIC17.21■□□□□ 0.35
TTC9CQ8N5M4 AC068587.7-201ENST00000641602 218 ntBASIC17.21■□□□□ 0.35
TTC9CQ8N5M4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TTC9CQ8N5M4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TTC9CQ8N5M4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TTC9CQ8N5M4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TTC9CQ8N5M4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
TTC9CQ8N5M4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.21■□□□□ 0.34
TTC9CQ8N5M4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
TTC9CQ8N5M4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.34
TTC9CQ8N5M4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TTC9CQ8N5M4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TTC9CQ8N5M4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC9CQ8N5M4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TTC9CQ8N5M4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TTC9CQ8N5M4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TTC9CQ8N5M4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC9CQ8N5M4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TTC9CQ8N5M4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC9CQ8N5M4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TTC9CQ8N5M4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.2■□□□□ 0.34
TTC9CQ8N5M4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TTC9CQ8N5M4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TTC9CQ8N5M4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TTC9CQ8N5M4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TTC9CQ8N5M4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TTC9CQ8N5M4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
TTC9CQ8N5M4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TTC9CQ8N5M4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TTC9CQ8N5M4 AC080038.3-201ENST00000623346 1952 ntBASIC17.19■□□□□ 0.34
TTC9CQ8N5M4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TTC9CQ8N5M4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TTC9CQ8N5M4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.19■□□□□ 0.34
TTC9CQ8N5M4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.19■□□□□ 0.34
TTC9CQ8N5M4 AC136469.2-201ENST00000623944 1028 ntBASIC17.19■□□□□ 0.34
TTC9CQ8N5M4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.19■□□□□ 0.34
TTC9CQ8N5M4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TTC9CQ8N5M4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TTC9CQ8N5M4 AC137767.1-201ENST00000602918 1920 ntBASIC17.19■□□□□ 0.34
TTC9CQ8N5M4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TTC9CQ8N5M4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TTC9CQ8N5M4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TTC9CQ8N5M4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TTC9CQ8N5M4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TTC9CQ8N5M4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TTC9CQ8N5M4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TTC9CQ8N5M4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TTC9CQ8N5M4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TTC9CQ8N5M4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TTC9CQ8N5M4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TTC9CQ8N5M4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.18■□□□□ 0.34
TTC9CQ8N5M4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.18■□□□□ 0.34
TTC9CQ8N5M4 AC139530.1-201ENST00000575312 1977 ntBASIC17.18■□□□□ 0.34
TTC9CQ8N5M4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TTC9CQ8N5M4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TTC9CQ8N5M4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.18■□□□□ 0.34
TTC9CQ8N5M4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TTC9CQ8N5M4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TTC9CQ8N5M4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TTC9CQ8N5M4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TTC9CQ8N5M4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.17■□□□□ 0.34
TTC9CQ8N5M4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.17■□□□□ 0.34
TTC9CQ8N5M4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TTC9CQ8N5M4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TTC9CQ8N5M4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TTC9CQ8N5M4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TTC9CQ8N5M4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TTC9CQ8N5M4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.17■□□□□ 0.34
TTC9CQ8N5M4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TTC9CQ8N5M4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TTC9CQ8N5M4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.17■□□□□ 0.34
TTC9CQ8N5M4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms