Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
XRN1Q8IZH2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
XRN1Q8IZH2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
XRN1Q8IZH2 AC083906.2-201ENST00000511578 360 ntBASIC30.82■■■□□ 2.52
XRN1Q8IZH2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC30.82■■■□□ 2.52
XRN1Q8IZH2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
XRN1Q8IZH2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC30.82■■■□□ 2.52
XRN1Q8IZH2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC30.81■■■□□ 2.52
XRN1Q8IZH2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC30.81■■■□□ 2.52
XRN1Q8IZH2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
XRN1Q8IZH2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC30.81■■■□□ 2.52
XRN1Q8IZH2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
XRN1Q8IZH2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC30.81■■■□□ 2.52
XRN1Q8IZH2 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC30.81■■■□□ 2.52
XRN1Q8IZH2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC30.81■■■□□ 2.52
XRN1Q8IZH2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC30.81■■■□□ 2.52
XRN1Q8IZH2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
XRN1Q8IZH2 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
XRN1Q8IZH2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
XRN1Q8IZH2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC30.8■■■□□ 2.52
XRN1Q8IZH2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC30.8■■■□□ 2.52
XRN1Q8IZH2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
XRN1Q8IZH2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
XRN1Q8IZH2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
XRN1Q8IZH2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC30.79■■■□□ 2.52
XRN1Q8IZH2 SLC29A4P1-201ENST00000398760 971 ntBASIC30.78■■■□□ 2.52
XRN1Q8IZH2 AC093827.2-201ENST00000512654 315 ntBASIC30.78■■■□□ 2.52
XRN1Q8IZH2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
XRN1Q8IZH2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC30.78■■■□□ 2.52
XRN1Q8IZH2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC30.78■■■□□ 2.52
XRN1Q8IZH2 AC007322.1-201ENST00000426983 750 ntBASIC30.78■■■□□ 2.52
XRN1Q8IZH2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC30.78■■■□□ 2.52
XRN1Q8IZH2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC30.78■■■□□ 2.52
XRN1Q8IZH2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
XRN1Q8IZH2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
XRN1Q8IZH2 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
XRN1Q8IZH2 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
XRN1Q8IZH2 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
XRN1Q8IZH2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
XRN1Q8IZH2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
XRN1Q8IZH2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.52
XRN1Q8IZH2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
XRN1Q8IZH2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC30.76■■■□□ 2.52
XRN1Q8IZH2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC30.76■■■□□ 2.52
XRN1Q8IZH2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC30.76■■■□□ 2.51
XRN1Q8IZH2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC30.76■■■□□ 2.51
XRN1Q8IZH2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC30.76■■■□□ 2.51
XRN1Q8IZH2 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC30.76■■■□□ 2.51
XRN1Q8IZH2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
XRN1Q8IZH2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC30.76■■■□□ 2.51
XRN1Q8IZH2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.51
XRN1Q8IZH2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
XRN1Q8IZH2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
XRN1Q8IZH2 AC073210.2-201ENST00000430369 194 ntBASIC30.76■■■□□ 2.51
XRN1Q8IZH2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC30.76■■■□□ 2.51
XRN1Q8IZH2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC30.76■■■□□ 2.51
XRN1Q8IZH2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC30.76■■■□□ 2.51
XRN1Q8IZH2 OXCT2P1-201ENST00000447263 1535 ntBASIC30.75■■■□□ 2.51
XRN1Q8IZH2 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
XRN1Q8IZH2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
XRN1Q8IZH2 APTR-203ENST00000430801 583 ntTSL 5 BASIC30.75■■■□□ 2.51
XRN1Q8IZH2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC30.75■■■□□ 2.51
XRN1Q8IZH2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
XRN1Q8IZH2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
XRN1Q8IZH2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC30.74■■■□□ 2.51
XRN1Q8IZH2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
XRN1Q8IZH2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
XRN1Q8IZH2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
XRN1Q8IZH2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
XRN1Q8IZH2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
XRN1Q8IZH2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
XRN1Q8IZH2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC30.73■■■□□ 2.51
XRN1Q8IZH2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
XRN1Q8IZH2 AC138932.3-201ENST00000567634 1902 ntBASIC30.73■■■□□ 2.51
XRN1Q8IZH2 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
XRN1Q8IZH2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
XRN1Q8IZH2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
XRN1Q8IZH2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC30.73■■■□□ 2.51
XRN1Q8IZH2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC30.73■■■□□ 2.51
XRN1Q8IZH2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC30.73■■■□□ 2.51
XRN1Q8IZH2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
XRN1Q8IZH2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
XRN1Q8IZH2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC30.72■■■□□ 2.51
XRN1Q8IZH2 EED-207ENST00000528180 1745 ntTSL 5 BASIC30.72■■■□□ 2.51
XRN1Q8IZH2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
XRN1Q8IZH2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
XRN1Q8IZH2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
XRN1Q8IZH2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC30.72■■■□□ 2.51
XRN1Q8IZH2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC30.72■■■□□ 2.51
XRN1Q8IZH2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
XRN1Q8IZH2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
XRN1Q8IZH2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC30.71■■■□□ 2.51
XRN1Q8IZH2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC30.71■■■□□ 2.51
XRN1Q8IZH2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC30.71■■■□□ 2.51
XRN1Q8IZH2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC30.71■■■□□ 2.51
XRN1Q8IZH2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
XRN1Q8IZH2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
XRN1Q8IZH2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC30.7■■■□□ 2.51
XRN1Q8IZH2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC30.7■■■□□ 2.51
XRN1Q8IZH2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms